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annotate alveo_api_key.xml @ 1:6fef3489d97c draft

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author stevecassidy
date Mon, 15 Aug 2016 23:45:46 -0400
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1 <tool id="alveo_api_key_storer" name="Store Alveo API Key" version="0.01" force_history_refresh="True">
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2 <description>for use with Alveo tools</description>
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4 <requirements>
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5 <requirement type="package" version="0.6">pyalveo</requirement>
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6 </requirements>
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7
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8 <command interpreter="python">
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9 alveo_api_key.py --api_key $api_key --output_path $output
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10 </command>
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11
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12 <inputs>
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13 <param name="api_key" type="text" size="30" label="API Key" help="Your Alveo API key"/>
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14 </inputs>
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15
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16 <outputs>
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17 <data format="txt" name="output" label="Alveo API key" />
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18 </outputs>
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19
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20 <tests>
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21 <test>
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22 <param name="api_key" value="your api key here" />
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23 <output name="output" file="api-key.dat" compare="contains" />
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24 </test>
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25 </tests>
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27 <help>Stores Alveo API keys for use with the Alveo Galaxy tools.</help>
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28
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29 <citations>
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30 <citation type='bibtex'>
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31 @article{cassidy2014alveo,
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32 title={The alveo virtual laboratory: a web based repository API},
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33 author={Cassidy, Steve and Estival, Dominique and Jones, Tim and Sefton, Peter and Burnham, Denis and Burghold, Jared and others},
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34 year={2014},
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35 publisher={Reykjavik, Iceland: European Language Resources Association}
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36 }
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37 </citation>
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38 </citations>
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39 </tool>