Mercurial > repos > stef > qdnaseq

changeset 12:7318921f937c draft

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Uploaded
author stef
date Mon, 16 Jun 2014 08:19:03 -0400
parents 821fb6bdbbeb
children 0a242c6cfdde
files tool_dependencies.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Jun 16 08:11:03 2014 -0400
+++ b/tool_dependencies.xml	Mon Jun 16 08:19:03 2014 -0400
@@ -22,7 +22,7 @@
 				</action>
 				<action type="shell_command">wget http://bioconductor.org/packages/release/bioc/src/contrib/QDNAseq_1.0.5.tar.gz</action>
 				<action type="shell_command">ls -l &amp;&amp; echo "print dir" &amp;&amp; pwd</action>
-				<action type="shell_command">export R_LIBS=$INSTALL_DIR &amp;&amp; R CMD INSTALL QDNAseq_1.0.5.tar.gz</action>
+				<action type="shell_command">export R_LIBS=$INSTALL_DIR &amp;&amp; R CMD INSTALL --build QDNAseq_1.0.5.tar.gz</action>
 				<!--<action type="shell_command">R CMD INSTALL QDNAseq_1.0.5.tar.gz</action>-->
 				
 				<action type="set_environment">