Mercurial > repos > stef > qdnaseq
changeset 12:7318921f937c draft
Uploaded
author | stef |
---|---|
date | Mon, 16 Jun 2014 08:19:03 -0400 |
parents | 821fb6bdbbeb |
children | 0a242c6cfdde |
files | tool_dependencies.xml |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/tool_dependencies.xml Mon Jun 16 08:11:03 2014 -0400 +++ b/tool_dependencies.xml Mon Jun 16 08:19:03 2014 -0400 @@ -22,7 +22,7 @@ </action> <action type="shell_command">wget http://bioconductor.org/packages/release/bioc/src/contrib/QDNAseq_1.0.5.tar.gz</action> <action type="shell_command">ls -l && echo "print dir" && pwd</action> - <action type="shell_command">export R_LIBS=$INSTALL_DIR && R CMD INSTALL QDNAseq_1.0.5.tar.gz</action> + <action type="shell_command">export R_LIBS=$INSTALL_DIR && R CMD INSTALL --build QDNAseq_1.0.5.tar.gz</action> <!--<action type="shell_command">R CMD INSTALL QDNAseq_1.0.5.tar.gz</action>--> <action type="set_environment">