Mercurial > repos > stef > qdnaseq

changeset 22:5e5611bc7497 draft

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Uploaded
author stef
date Tue, 17 Jun 2014 05:35:22 -0400
parents 45c44ee8ab1a
children 5f8b99ae75ef
files tool_dependencies.xml
diffstat 1 files changed, 5 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Jun 17 05:16:39 2014 -0400
+++ b/tool_dependencies.xml	Tue Jun 17 05:35:22 2014 -0400
@@ -18,10 +18,12 @@
 				<action type="shell_command">echo "[DEBUG] BEFORE:" &amp;&amp; pwd</action>
 				<action type="shell_command">echo "[DEBUG] DIR LISTING:" &amp;&amp; ls -l</action>
 				<action type="shell_command">echo "[DEBUG] DIR LISTING ONE UP:" &amp;&amp; ls -l ../</action>
+				<!--
 				<action type="move_file">
 					<source>../QDNAseq.R</source>
 					<destination>./</destination>
 				</action>
+				-->
 				
 				<action type="shell_command">echo "[DEBUG] AFTER:" &amp;&amp; pwd</action>
 				<action type="shell_command">echo "[DEBUG] DIR LISTING:" &amp;&amp; ls -l</action>
@@ -42,7 +44,9 @@
 				<action type="shell_command">echo "[DEBUG] DIR LISTING:" &amp;&amp; ls -l</action>
 				
 				<action type="shell_command">echo "[DEBUG] NOW ABOUT TO INSTALL"</action>
-				<action type="shell_command">export R_LIBS=$INSTALL_DIR &amp;&amp; R CMD INSTALL --build QDNAseq_1.0.5.tar.gz</action>
+				<!--
+<action type="shell_command">export R_LIBS=$INSTALL_DIR &amp;&amp; R CMD INSTALL --> <!--build QDNAseq_1.0.5.tar.gz</action>
+				-->
 				<!--<action type="shell_command">R CMD INSTALL QDNAseq_1.0.5.tar.gz</action>-->
 			</actions>
 		</install>