Mercurial > repos > stef > package_qdnaseq_1_0_5
changeset 6:def7829bec84 draft
Uploaded
| author | stef |
|---|---|
| date | Tue, 07 Oct 2014 05:56:53 -0400 |
| parents | bbfcf3187538 |
| children | d968a236421c |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 26 insertions(+), 1 deletions(-) [+] |
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--- a/tool_dependencies.xml Mon Oct 06 11:19:41 2014 -0400 +++ b/tool_dependencies.xml Tue Oct 07 05:56:53 2014 -0400 @@ -13,11 +13,36 @@ <repository changeset_revision="a6cc7706ea14" name="package_r_3_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> <package name="R" version="3.1.0" /> </repository> - + <!-- <package>http://bioconductor.org/packages/release/bioc/src/contrib/QDNAseq_1.0.5.tar.gz</package> <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/limma_3.20.9.tar.gz</package> <package>http://bioconductor.org/packages/release/bioc/src/contrib/Rsamtools_1.16.1.tar.gz</package> + --> + <package>http://cran.fhcrc.org/src/contrib/R.methodsS3_1.6.1.tar.gz</package> + <package>http://cran.fhcrc.org/src/contrib/matrixStats_0.10.0.tar.gz</package> + <package>http://cran.fhcrc.org/src/contrib/R.oo_1.18.0.tar.gz</package> + <package>http://cran.fhcrc.org/src/contrib/R.utils_1.32.4.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/BiocGenerics_0.10.0.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/Biobase_2.24.0.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/limma_3.20.5.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/marray_1.42.0.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/CGHbase_1.24.0.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/impute_1.38.1.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/DNAcopy_1.38.1.tar.gz</package> + <package>http://cran.fhcrc.org/src/contrib/snow_0.3-13.tar.gz</package> + <package>http://cran.fhcrc.org/src/contrib/snowfall_1.84-6.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/CGHcall_2.26.0.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/IRanges_1.22.9.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/GenomeInfoDb_1.0.2.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/XVector_0.4.0.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/GenomicRanges_1.16.4.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/zlibbioc_1.10.0.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/Biostrings_2.32.1.tar.gz</package> + <package>http://cran.fhcrc.org/src/contrib/bitops_1.0-6.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/Rsamtools_1.16.1.tar.gz</package> + <package>http://bioconductor.org/packages/2.14/bioc/src/contrib/QDNAseq_1.0.5.tar.gz</package> + <!-- <package>http://path/to/R.methodsS3_1.6.1.tar.gz</package> <package>http://path/to/matrixStats_0.10.0.tar.gz</package>