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changeset 84:b641568b1500 draft

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Uploaded
author stef
date Thu, 23 Apr 2015 09:50:32 -0400
parents 9995d7db92ff
children 01305ba40dce
files falco-filter-report.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/falco-filter-report.xml	Mon Mar 23 07:45:44 2015 -0400
+++ b/falco-filter-report.xml	Thu Apr 23 09:50:32 2015 -0400
@@ -4,13 +4,14 @@
     
     <requirement type="package" version="0.1.19">samtools</requirement>
     <requirement type="package" version="3.0.1">R</requirement>
+    <requirement type="set_environment">FALCO_PATH</requirement>
     
   </requirements>
 
   <description>FALCO Amplicon Analysis Pipeline Reporting</description>
 
   <command interpreter="bash">
-    falco-filter-report.sh $falco_cfg;
+    falco-filter-report.sh $falco_cfg \$FALCO_PATH;
   </command>
 
   <stdio>