view tool-data/fasta_index.loc.sample @ 50:4965026bb54e draft

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author stef
date Wed, 31 Dec 2014 06:03:28 -0500
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#This is a sample file distributed with Galaxy that enables tools
#to use a directory with indexed fasta files. The _index.loc file has 
#this format (longer white space characters are TAB characters):
#
#<unique_build_id>   <dbkey>   <display_name>   <file_path>
#
#So, for example, if you had phiX indexed stored in 
#/example/path/
#then the _index.loc entry would look like this:
#
#phiX174   phiX   phiX Pretty   /example/path/phiX.fa
#
#and your /example/path/ directory
#would contain phiX.fa.* files:
#
# phiX.fa.fai
# phiX.fa.dict
#
#Your _index.loc file should include an entry per line for each
#index set you have stored. For example:
#
#phiX174	phiX	phiX174			/path/to/phiX.fa
#hg18		hg18	hg18 Full		/path/to/hg18full.fa
#hg19		hg19	hg19			/path/to/hg19.fa
#...etc...
#