Mercurial > repos > spficklin > aurora_wgcna
changeset 8:994d120282a9 draft
Uploaded
author | spficklin |
---|---|
date | Thu, 21 Nov 2019 16:48:51 +0000 |
parents | ffbafe466107 |
children | 32ef2e3669f9 |
files | aurora_wgcna.Rmd |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/aurora_wgcna.Rmd Thu Nov 21 09:26:30 2019 +0000 +++ b/aurora_wgcna.Rmd Thu Nov 21 16:48:51 2019 +0000 @@ -183,7 +183,7 @@ } ``` -The network is housed in a *n* x *n* similarity matrix known as the the Topological Overlap Matrix (TOM), where *n* is the number of genes and the value in each cell indicates the measure of similarity in terms of correlation of expression and interconnectedness. The following heat maps shows the TOM. Note, that the dendrograms in the TOM heat map may from what is shown above. This is because a subset of genes were selected to draw the heat maps in order to save on computational time. +The network is housed in a *n* x *n* similarity matrix known as the the Topological Overlap Matrix (TOM), where *n* is the number of genes and the value in each cell indicates the measure of similarity in terms of correlation of expression and interconnectedness. The following heat maps shows the TOM. Note, that the dendrograms in the TOM heat map may differ from what is shown above. This is because a subset of genes were selected to draw the heat maps in order to save on computational time. ```{r} for (i in blocks) {