Mercurial > repos > simon-gladman > snippy

changeset 4:c4ba0d6c3304 draft

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Uploaded
author bgruening
date Sat, 11 Jul 2015 09:28:07 -0400
parents 05819a6efa61
children 0fdc06460c61
files snippy.xml tool_dependencies.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/snippy.xml	Fri Jul 10 06:32:24 2015 -0400
+++ b/snippy.xml	Sat Jul 11 09:28:07 2015 -0400
@@ -7,7 +7,7 @@
     </stdio>
 
     <command><![CDATA[
-      cp $ref foo.fna &&
+      ln -s $ref foo.fna &&
       snippy
       --outdir out
       --cpus "\${GALAXY_SLOTS:-1}"
--- a/tool_dependencies.xml	Fri Jul 10 06:32:24 2015 -0400
+++ b/tool_dependencies.xml	Sat Jul 11 09:28:07 2015 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="snippy" version="2.6">
-        <repository name="package_snippy_2_6" owner="simon-gladman" changeset_revision="7ae49fe1c5ef" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+        <repository changeset_revision="7ae49fe1c5ef" name="package_snippy_2_6" owner="simon-gladman" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>