Mercurial > repos > simon-gladman > snippy

diff snippy_core_wrapper.pl @ 22:577b1b17a0ff draft default tip

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Added snippy-core tool
author simon-gladman
date Thu, 09 Jun 2016 09:44:50 -0400
parents bcb74072d3a6
children
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--- a/snippy_core_wrapper.pl	Thu Jun 09 09:38:24 2016 -0400
+++ b/snippy_core_wrapper.pl	Thu Jun 09 09:44:50 2016 -0400
@@ -55,7 +55,7 @@
 
   @Options = (
     {OPT=>"help",    VAR=>\&usage,             DESC=>"This help"},
-    {OPT=>"mincov=f",  VAR=>\$mincov, DEFAULT=>'10.0', DESC=>"The minimum coverage to consider."},
+    {OPT=>"mincov=i",  VAR=>\$mincov, DEFAULT=>'10.0', DESC=>"The minimum coverage to consider."},
     {OPT=>"noref!", VAR=>\$noref, DEFAULT=>0, DESC=>"Don't include the reference in the alignment."},
     {OPT=>"indirs=s", VAR=>\$indirs, DEFAULT=>"", DESC=>"A whitespace delimited list of the snippy output zipped dirs."},
   );