Mercurial > repos > shians > shrnaseq

changeset 33:64fe9451b9e4

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- Testing with bgruening's script
author shian_su <registertonysu@gmail.com>
date Thu, 20 Nov 2014 10:54:15 +1100
parents bc140d35bafc
children b227e4468818
files tool_dependencies.xml
diffstat 1 files changed, 6 insertions(+), 9 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Nov 20 10:42:59 2014 +1100
+++ b/tool_dependencies.xml	Thu Nov 20 10:54:15 2014 +1100
@@ -1,18 +1,15 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="R_3_1_0" version="3.1.0">
-        <repository name="package_r_3_1_0" owner="iuc">
+    <package name="R" version="3.0.1" />
+        <repository name="package_r_3_0_1" owner="bgruening">
     </package>
-    <package name="R_3_1_0" version="3.1.0">'
+    <package name="R" version="3.0.1" />
         <actions>
             <action type="setup_r_environment">
-                <repository name="package_r_3_1_0" owner="iuc">
-                    <package name="R_3_1_0" version="3.1.0" />
+                <repository name="package_r_3_0_1" owner="bgruening">
+                    <package name="R" version="3.0.1" />
                 </repository>
-                <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/locfit_1.5-9.1.tar.gz</package>
-                <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/statmod_1.4.20.tar.gz</package>
-                <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/limma_3.20.9.tar.gz</package>
-                <package>https://github.com/fubar2/galaxy_tool_source/blob/master/RELEASE_2_14/edgeR_3.6.8.tar.gz</package>
+                <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_0_18BiocGenerics_0.6.0.tar.gz6</package>
             </action>
         </actions>
     </package>