Mercurial > repos > sh477 > data_manager_vep_cache_downloader
changeset 6:3bd006fa2be2 draft
Renamed sample and test files, finally it is working
| author | sh477 |
|---|---|
| date | Mon, 28 Feb 2022 14:42:50 +0000 |
| parents | a3dba0440f08 |
| children | 7890790d2afd |
| files | data_manager_conf.xml.sample data_manager_conf.xml.test test-data/vep_versioned_caches.loc tool_data_table_conf.xml.sample tool_data_table_conf.xml.test |
| diffstat | 5 files changed, 25 insertions(+), 24 deletions(-) [+] |
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--- a/data_manager_conf.xml.sample Mon Feb 28 09:17:29 2022 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,12 +0,0 @@ -<tables> - <!-- Table of installed versioned vep cache data --> - <table name="vep_versioned_caches" comment_char="#"> - <columns>value, dbkey, version, cachetype, name, path</columns> - <file path="tool-data/vep_versioned_caches.loc" /> - </table> - <!-- Locations of dbkeys and len files under genome directory --> - <table name="__dbkeys__" comment_char="#"> - <columns>value, name, len_path</columns> - <file path="tool-data/dbkeys.loc" /> - </table> -</tables> \ No newline at end of file
--- a/data_manager_conf.xml.test Mon Feb 28 09:17:29 2022 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,12 +0,0 @@ -<tables> - <!-- Table of installed versioned vep cache data --> - <table name="vep_versioned_caches" comment_char="#"> - <columns>value, dbkey, version, cachetype, name, path</columns> - <file path="${__HERE__}/test-data/vep_versioned_caches.loc" /> - </table> - <!-- Locations of dbkeys and len files under genome directory --> - <table name="__dbkeys__" comment_char="#"> - <columns>value, name, len_path</columns> - <file path="${__HERE__}/test-data/dbkeys.loc" /> - </table> -</tables> \ No newline at end of file
--- a/test-data/vep_versioned_caches.loc Mon Feb 28 09:17:29 2022 +0000 +++ b/test-data/vep_versioned_caches.loc Mon Feb 28 14:42:50 2022 +0000 @@ -1,2 +1,3 @@ #<value> <dbkey> <version> <cachetype> <name> <path> # +caenorhabditis_elegans_vep_105_WBcel235 ce11 105 default C. elegans ce11 (V105) /home/sebastian/galaxy/tool-data/vep/105/ce11/default
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.sample Mon Feb 28 14:42:50 2022 +0000 @@ -0,0 +1,12 @@ +<tables> + <!-- Table of installed versioned vep cache data --> + <table name="vep_versioned_caches" comment_char="#"> + <columns>value, dbkey, version, cachetype, name, path</columns> + <file path="tool-data/vep_versioned_caches.loc" /> + </table> + <!-- Locations of dbkeys and len files under genome directory --> + <table name="__dbkeys__" comment_char="#"> + <columns>value, name, len_path</columns> + <file path="tool-data/dbkeys.loc" /> + </table> +</tables> \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.test Mon Feb 28 14:42:50 2022 +0000 @@ -0,0 +1,12 @@ +<tables> + <!-- Table of installed versioned vep cache data --> + <table name="vep_versioned_caches" comment_char="#"> + <columns>value, dbkey, version, cachetype, name, path</columns> + <file path="${__HERE__}/test-data/vep_versioned_caches.loc" /> + </table> + <!-- Locations of dbkeys and len files under genome directory --> + <table name="__dbkeys__" comment_char="#"> + <columns>value, name, len_path</columns> + <file path="${__HERE__}/test-data/dbkeys.loc" /> + </table> +</tables> \ No newline at end of file