Mercurial > repos > scottx611x > qualimap2_bamqc

diff qualimap_bamqc.py @ 44:4cfe71d40d44 draft

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planemo upload for repository https://github.com/scottx611x/qualimap2 commit 9fafbbc012490e70d06fcef4704a1e4a45b382c5-dirty
author scottx611x
date Sun, 29 Jul 2018 14:19:07 -0400
parents 2395818cb1f1
children
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--- a/qualimap_bamqc.py	Sun Jul 29 14:12:32 2018 -0400
+++ b/qualimap_bamqc.py	Sun Jul 29 14:19:07 2018 -0400
@@ -35,11 +35,7 @@
 
     args = parser.parse_args()
 
-    qualimap_bamqc(
-        args.input_file,
-        QUALIMAP_OUPUT_DIR,
-        args.java_mem_size
-    )
+    qualimap_bamqc(args.input_file, args.java_mem_size)
 
     shutil.make_archive(
         'raw_data_qualimapReport',