diff qualimap_bamqc.py @ 36:0e6aeed62025 draft

planemo upload for repository https://github.com/scottx611x/qualimap2 commit dc78b7c4b1780b316ca4aba2be247969ac1100ec-dirty
author scottx611x
date Thu, 26 Jul 2018 16:57:57 -0400
parents a3e9c80894dd
children 407b6a65c867
line wrap: on
line diff
--- a/qualimap_bamqc.py	Thu Jul 26 16:55:10 2018 -0400
+++ b/qualimap_bamqc.py	Thu Jul 26 16:57:57 2018 -0400
@@ -42,6 +42,7 @@
         args.java_mem_size
     )
 
+    print(os.listdir(os.getcwd()))
     print(os.listdir(args.out_dir))
 
     shutil.move(args.out_dir + "/genome_results.txt", "./genome_results.txt")
@@ -52,6 +53,8 @@
         args.out_dir + '/raw_data_qualimapReport'
     )
 
+    print(os.listdir(os.getcwd()))
+    print(os.listdir(args.out_dir))
 
 if __name__ == "__main__":
     main()