Mercurial > repos > sblanck > smagexp
changeset 21:f953fdee364c draft
planemo upload for repository https://github.com/sblanck/smagexp/tree/master/smagexp_tools commit ecb5d3451f1623e0cc649ac5197e66995ce19eef-dirty
| author | sblanck |
|---|---|
| date | Thu, 22 Feb 2018 10:19:47 -0500 |
| parents | a4015af2ae12 |
| children | c44bb4ec5c78 |
| files | MetaMA.R MetaRNAseq.xml repository_dependencies.xml test.txt |
| diffstat | 3 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/MetaMA.R Mon Jan 15 04:50:08 2018 -0500 +++ b/MetaMA.R Thu Feb 22 10:19:47 2018 -0500 @@ -72,7 +72,7 @@ biocLite(species) } -#library("org.Hs.eg.db") +library("org.Hs.eg.db") x <- org.Hs.egUNIGENE mapped_genes <- mappedkeys(x) link <- as.list(x[mapped_genes])
--- a/MetaRNAseq.xml Mon Jan 15 04:50:08 2018 -0500 +++ b/MetaRNAseq.xml Thu Feb 22 10:19:47 2018 -0500 @@ -31,12 +31,12 @@ </command> <inputs> - <param format="tabular" name="inputList" multiple="true" type="data" optional="false" label="Counts file" help="Must have the same number of row in each study. The experimental conditions must be specified in the header of each file"/> + <param format="tabular" name="inputs" multiple="true" type="data" optional="false" label="Counts file" help="Must have the same number of row in each study. The experimental conditions must be specified in the header of each file"/> </inputs> <outputs> <data format="tabular" name="top_table" label="Summary of meta-analysis and single studie analysis from ${tool.name} on ${on_string}"/> - <data format="html" name="diagnostic_html" label="Charts for ${tool.name} on ${on_string}"/> + <data format="html" name="result_html" label="Charts for ${tool.name} on ${on_string}"/> </outputs> <tests>
--- a/repository_dependencies.xml Mon Jan 15 04:50:08 2018 -0500 +++ b/repository_dependencies.xml Thu Feb 22 10:19:47 2018 -0500 @@ -1,4 +1,4 @@ <?xml version="1.0"?> <repositories description="smagexp datatypes"> - <repository changeset_revision="59b60358ef6e" name="smagexp_datatypes" owner="sblanck" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="59b60358ef6e" name="smagexp_datatypes" owner="sblanck" toolshed="https://toolshed.g2.bx.psu.edu" /> </repositories>