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changeset 0:64bb2981d07b draft default tip

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Imported from capsule None
author sblanck
date Thu, 21 Jan 2016 11:01:57 -0500
parents
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files GEOQuery.xml
diffstat 1 files changed, 27 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/GEOQuery.xml	Thu Jan 21 11:01:57 2016 -0500
@@ -0,0 +1,27 @@
+<tool id="GEOQuery" name="GEOQuery">
+	<description>GEOQuery wrapper</description>
+	<requirements>
+	  <container type="docker">sblanck/testtool:latest</container>
+	</requirements>
+	<command>
+		/GEOquery/stderr_wrapper.py Rscript /GEOquery/GEOQuery.R $GEOQueryID $GEOQueryData $GEOQueryRData $conditions
+	</command>
+
+	<inputs>
+		<param name="GEOQueryID" type="text" size="12" optional="false" label="GEOQuery ID" help="">
+			<validator type="empty_field"/>
+		</param>
+
+	</inputs>
+
+	<outputs>
+		<data format="tabular" name="GEOQueryData" label="GEOQuery Data of ${GEOQueryID}"/>
+		<data format="txt" name="conditions" label="conditions of ${GEOQueryID}"/>
+        <data format="rdata" name="GEOQueryRData" label="GEOQuery RData of ${GEOQueryID}"/>		
+	</outputs>
+
+	<help>
+		
+	</help>
+
+</tool>