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1 <tool id="GEOQuery" name="GEOQuery">
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2 <description>GEOQuery wrapper</description>
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3 <requirements>
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4 <container type="docker">sblanck/testtool:latest</container>
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5 </requirements>
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6 <command>
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7 /GEOquery/stderr_wrapper.py Rscript /GEOquery/GEOQuery.R $GEOQueryID $GEOQueryData $GEOQueryRData $conditions
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8 </command>
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9
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10 <inputs>
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11 <param name="GEOQueryID" type="text" size="12" optional="false" label="GEOQuery ID" help="">
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12 <validator type="empty_field"/>
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13 </param>
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14
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15 </inputs>
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16
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17 <outputs>
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18 <data format="tabular" name="GEOQueryData" label="GEOQuery Data of ${GEOQueryID}"/>
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19 <data format="txt" name="conditions" label="conditions of ${GEOQueryID}"/>
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20 <data format="rdata" name="GEOQueryRData" label="GEOQuery RData of ${GEOQueryID}"/>
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21 </outputs>
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22
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23 <help>
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24
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25 </help>
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26
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27 </tool>
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