Mercurial > repos > sauria > package_h5py_2_5_0

changeset 1:3b17bd6fa3ae draft default tip

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planemo upload for repository https://github.com/bxlab/galaxy_tools/testoolshed/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
author sauria
date Wed, 03 Jun 2015 14:22:19 -0400
parents cac2248ec1fd
children
files tool_dependencies.xml
diffstat 1 files changed, 7 insertions(+), 10 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Apr 16 16:17:00 2015 -0400
+++ b/tool_dependencies.xml	Wed Jun 03 14:22:19 2015 -0400
@@ -4,43 +4,40 @@
         <repository changeset_revision="3412ecd1792d" name="package_hdf5_1_8_12" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="numpy" version="1.7.1">
-        <repository name="package_numpy_1_7" owner="iuc" changeset_revision="11099cc214d5" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="bbfe29f56566" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="cython" version="0.20.1">
-        <repository name="package_cython_0_20_1" owner="iuc" changeset_revision="749f11b9358a" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="749f11b9358a" name="package_cython_0_20_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="h5py" version="2.5.0">
         <install version="1.0">
             <actions>
                 <action type="download_by_url">https://pypi.python.org/packages/source/h/h5py/h5py-2.5.0.tar.gz</action>
-                
                 <action type="set_environment_for_install">
-                    <repository changeset_revision="3412ecd1792d" name="package_hdf5_1_8_12" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"  >
+                    <repository changeset_revision="3412ecd1792d" name="package_hdf5_1_8_12" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="hdf5" version="1.8.12" />
                     </repository>
-                    <repository name="package_numpy_1_7" owner="iuc" changeset_revision="11099cc214d5" toolshed="https://testtoolshed.g2.bx.psu.edu" >
+                    <repository changeset_revision="bbfe29f56566" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="numpy" version="1.7.1" />
                     </repository>
-                    <repository name="package_cython_0_20_1" owner="iuc" changeset_revision="749f11b9358a" toolshed="https://testtoolshed.g2.bx.psu.edu" >
+                    <repository changeset_revision="749f11b9358a" name="package_cython_0_20_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="cython" version="0.20.1" />
                     </repository>
                     <environment_variable action="set_to" name="HDF5_DIR">$HDF5_LIBRARY_PATH</environment_variable>
                 </action>
-
                 <action type="make_directory">$INSTALL_DIR/lib/python</action>
                 <action type="shell_command">
                     export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
                     python setup.py install --install-lib $INSTALL_DIR/lib/python
                 </action>
-
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                     <environment_variable action="set_to" name="PYTHONPATH_H5PY">$INSTALL_DIR/lib/python</environment_variable>
-                    </action>
+                </action>
             </actions>
         </install>
         <readme>
             Compiling h5py requires cython.
         </readme>
     </package>
-</tool_dependency>
\ No newline at end of file
+</tool_dependency>