Mercurial > repos > saskia-hiltemann > mothur_align_check

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 8f2b9b6c89892710bd5e0d8e35bcd8b645b0e44f
author saskia-hiltemann
date Tue, 07 Jun 2016 10:47:17 -0400
parents 48b3a755bd02
children
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48b3a755bd02 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit ecf9d5a72087f0a50a97b183162f10b81dfd9160-dirty
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1 <macros>
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2 <xml name="requirements">
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3 <requirements>
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4 <requirement type="package" version="1.36.1">mothur</requirement>
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5 </requirements>
48b3a755bd02 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit ecf9d5a72087f0a50a97b183162f10b81dfd9160-dirty
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6 </xml>
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7 <xml name="version_command">
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8 <version_command>mothur "#help()" | sed '7q;d' | cut -d" " -f2 </version_command>
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9 </xml>
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10 <token name="@WRAPPER_VERSION@">1.36.1</token>
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11 <token name="@MOTHUR_OVERVIEW@">
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12 <![CDATA[
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13
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14 **Mothur Overview**
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16 Mothur is a comprehensive suite of tools for microbial ecology community. It is initiated by Dr. Patrick Schloss and his software development team
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17 in the Department of Microbiology and Immunology at The University of Michigan. For more information, see Mothur-Wiki_.
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19 .. _Mothur-Wiki: http://www.mothur.org/wiki/Main_Page
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20
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21 ]]>
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22 </token>
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23 <xml name="labeloptions">
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24 <options>
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25 <filter type="data_meta" ref="otu" key="labels"/>
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26 </options>
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27 </xml>
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28 <xml name="logfile-test">
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29 <output name="logfile" ftype="txt">
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30 <assert_contents>
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31 <has_text text="mothur"/>
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32 <has_text text="@WRAPPER_VERSION@"/>
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33 </assert_contents>
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34 </output>
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35 </xml>
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36 <xml name="citations">
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37 <citations>
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38 <citation type="doi">10.1128/AEM.01541-09</citation>
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39 <yield/>
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40 </citations>
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41 </xml>
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42 </macros>