Mercurial > repos > sanbi-uwc > shapeit_phase
changeset 7:ce32a30e0594 draft
planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry commit 72b6cb6029a3979b51e796a8c210fcf903cf7b23
| author | sanbi-uwc |
|---|---|
| date | Tue, 18 Sep 2018 01:01:16 -0400 |
| parents | 9edc0fb317f7 |
| children | 00788810fe57 |
| files | tool-data/shapeit2_ref.loc.sample tool-data/shapeit_ref.loc.sample tool_data_table_conf.xml.sample |
| diffstat | 3 files changed, 10 insertions(+), 10 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/shapeit2_ref.loc.sample Tue Sep 18 01:01:16 2018 -0400 @@ -0,0 +1,7 @@ +#This file lists the locations of SHAPEIT reference data connections +# +#<value> <name> <path> <reference_file_prefix> <map_file_prefix> <sample_file_prefix> +# +#For example +# +#1000G_Phase3 1000 Genomes project haplotypes /path/to/shapeit_ref/1000G 1000GP_Phase3_chr genetic_map_chr 1000GP_Phase3
--- a/tool-data/shapeit_ref.loc.sample Mon Sep 17 06:12:39 2018 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,7 +0,0 @@ -#This file lists the locations of SHAPEIT reference data connections -# -#<value> <description> <path> <reference_file_prefix> <map_file_prefix> <sample_file_prefix> -# -#For example -# -#1000G_Phase3 1000 Genomes project haplotypes /path/to/shapeit_ref/1000G 1000GP_Phase3_chr genetic_map_chr 1000GP_Phase3
--- a/tool_data_table_conf.xml.sample Mon Sep 17 06:12:39 2018 -0400 +++ b/tool_data_table_conf.xml.sample Tue Sep 18 01:01:16 2018 -0400 @@ -1,6 +1,6 @@ <tables> - <table name="shapeit_ref" comment_char="#"> + <table name="shapeit2_ref" comment_char="#"> <columns>value, name, path, reference_prefix, map_prefix, sample_prefix</columns> - <file path="tool-data/shapeit_ref.loc" /> + <file path="tool-data/shapeit2_ref.loc" /> </table> -</tables> \ No newline at end of file +</tables>