# HG changeset patch
# User sanbi-uwc
# Date 1537246876 14400
# Node ID ce32a30e0594f1c90c58998eabe15221447a6576
# Parent  9edc0fb317f73611b72783a6f56d6148229baf29
planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry commit 72b6cb6029a3979b51e796a8c210fcf903cf7b23

diff -r 9edc0fb317f7 -r ce32a30e0594 tool-data/shapeit2_ref.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/shapeit2_ref.loc.sample	Tue Sep 18 01:01:16 2018 -0400
@@ -0,0 +1,7 @@
+#This file lists the locations of SHAPEIT reference data connections
+#
+#<value>	<name>	<path>	<reference_file_prefix>	<map_file_prefix>	<sample_file_prefix>
+#
+#For example
+#
+#1000G_Phase3	1000 Genomes project haplotypes	/path/to/shapeit_ref/1000G	1000GP_Phase3_chr	genetic_map_chr	1000GP_Phase3
diff -r 9edc0fb317f7 -r ce32a30e0594 tool-data/shapeit_ref.loc.sample
--- a/tool-data/shapeit_ref.loc.sample	Mon Sep 17 06:12:39 2018 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,7 +0,0 @@
-#This file lists the locations of SHAPEIT reference data connections
-#
-#<value>	<description>	<path>	<reference_file_prefix>	<map_file_prefix>	<sample_file_prefix>
-#
-#For example
-#
-#1000G_Phase3	1000 Genomes project haplotypes	/path/to/shapeit_ref/1000G	1000GP_Phase3_chr	genetic_map_chr	1000GP_Phase3
diff -r 9edc0fb317f7 -r ce32a30e0594 tool_data_table_conf.xml.sample
--- a/tool_data_table_conf.xml.sample	Mon Sep 17 06:12:39 2018 -0400
+++ b/tool_data_table_conf.xml.sample	Tue Sep 18 01:01:16 2018 -0400
@@ -1,6 +1,6 @@
 <tables>
-    <table name="shapeit_ref" comment_char="#">
+    <table name="shapeit2_ref" comment_char="#">
         <columns>value, name, path, reference_prefix, map_prefix, sample_prefix</columns>
-        <file path="tool-data/shapeit_ref.loc" />
+        <file path="tool-data/shapeit2_ref.loc" />
     </table>
-</tables>
\ No newline at end of file
+</tables>