Mercurial > repos > sanbi-uwc > shapeit_phase
changeset 15:201d098d6d67 draft
planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry commit 72b6cb6029a3979b51e796a8c210fcf903cf7b23-dirty
| author | sanbi-uwc |
|---|---|
| date | Tue, 18 Sep 2018 06:39:22 -0400 |
| parents | f92f1cc9e382 |
| children | 1a00583b6b2c |
| files | shapeit_phase.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/shapeit_phase.xml Tue Sep 18 06:36:24 2018 -0400 +++ b/shapeit_phase.xml Tue Sep 18 06:39:22 2018 -0400 @@ -1,4 +1,4 @@ -<tool id="shapeit_phase" name="shapeit_phase" version="0.13.0"> +<tool id="shapeit_phase" name="shapeit_phase" version="0.14.0"> <description>genomic data with or without reference panel</description> <requirements> @@ -44,7 +44,7 @@ exit 1 ; fi && #end if - #if $use_genetic_map.genetic_map_select == "use_genetic_map_yes" and $use_genetic_map.genetic_map_from_table.genetic_map_from_table_select == "genetic_map_from_table_yes": + #if $use_genetic_map.use_genetic_map_select == "use_genetic_map_yes" and $use_genetic_map.genetic_map_from_table.genetic_map_from_table_select == "genetic_map_from_table_yes": MAP_DIR='${use_genetic_map.genetic_map_from_table.map_from_table.fields.path}' && MAP_PREFIX='${use_genetic_map.genetic_map_from_table.map_from_table.fields.map_prefix}' && MAP=`ls \${MAP_DIR}/\${MAP_PREFIX}\${PART}_*` &&