# HG changeset patch
# User sanbi-uwc
# Date 1537267162 14400
# Node ID 201d098d6d67b42dbef0ce56ba26d87654008c36
# Parent  f92f1cc9e382aa30518b313b1e072ed529f1b449
planemo upload for repository https://github.com/CPGRZA/cpgr_ancestry commit 72b6cb6029a3979b51e796a8c210fcf903cf7b23-dirty

diff -r f92f1cc9e382 -r 201d098d6d67 shapeit_phase.xml
--- a/shapeit_phase.xml	Tue Sep 18 06:36:24 2018 -0400
+++ b/shapeit_phase.xml	Tue Sep 18 06:39:22 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="shapeit_phase" name="shapeit_phase" version="0.13.0">
+<tool id="shapeit_phase" name="shapeit_phase" version="0.14.0">
     <description>genomic data with or without reference panel</description>
 
     <requirements>
@@ -44,7 +44,7 @@
             exit 1 ;
           fi &&
         #end if
-        #if $use_genetic_map.genetic_map_select == "use_genetic_map_yes" and $use_genetic_map.genetic_map_from_table.genetic_map_from_table_select == "genetic_map_from_table_yes":
+        #if $use_genetic_map.use_genetic_map_select == "use_genetic_map_yes" and $use_genetic_map.genetic_map_from_table.genetic_map_from_table_select == "genetic_map_from_table_yes":
           MAP_DIR='${use_genetic_map.genetic_map_from_table.map_from_table.fields.path}' &&
           MAP_PREFIX='${use_genetic_map.genetic_map_from_table.map_from_table.fields.map_prefix}' &&
           MAP=`ls \${MAP_DIR}/\${MAP_PREFIX}\${PART}_*` &&