Mercurial > repos > sanbi-uwc > novo_sort

changeset 5:6e11ef75c56c draft

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planemo upload for repository https://github.com/zipho/novo_sort commit 91b08bec675d4e76b371b0f01bc0729cd6fbacdc
author sanbi-uwc
date Fri, 01 Apr 2016 10:16:18 -0400
parents 146641fe5ff6
children e35fbd921b6b
files novo_sort.py
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/novo_sort.py	Fri Apr 01 10:15:24 2016 -0400
+++ b/novo_sort.py	Fri Apr 01 10:16:18 2016 -0400
@@ -28,6 +28,6 @@
     parser.add_argument('--bam_filename')
     args = parser.parse_args()
    
-    novo_sort(args.bam_filename, output_filename)
+    novo_sort(args.bam_filename, args.output_filename)
 
 if __name__ == "__main__": main()