Mercurial > repos > sanbi-uwc > lukasa
changeset 3:715a727e3b65 draft
planemo upload for repository https://github.com/pvanheus/lukasa commit 7bb82d5a0d35af239d941bc0d553f714a86a2e9f-dirty
| author | sanbi-uwc |
|---|---|
| date | Thu, 20 Oct 2022 09:38:33 +0000 |
| parents | a2eda8fd2737 |
| children | e4ebea0307b6 |
| files | test-data/spaln_out.gff3 test-data/spaln_out_no_st.gff3 |
| diffstat | 2 files changed, 123 insertions(+), 123 deletions(-) [+] |
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--- a/test-data/spaln_out.gff3 Thu Oct 20 09:11:54 2022 +0000 +++ b/test-data/spaln_out.gff3 Thu Oct 20 09:38:33 2022 +0000 @@ -1,63 +1,63 @@ ##gff-version 3 ##sequence-region NW_017366533.1 906 39583 -NW_017366533.1 ALN gene 908 3313 1278 + . ID=gene00001;Name=NW_017366533.1_1 -NW_017366533.1 ALN mRNA 908 3313 1278 + . ID=mRNA1_00001;Parent=gene00001;Name=NW_017366533.1_1 -NW_017366533.1 ALN cds 908 1293 -49 + 0 ID=cds1_00001;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 101 152 + -NW_017366533.1 ALN cds 1403 1551 207 + 2 ID=cds1_00002;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 153 202 + -NW_017366533.1 ALN cds 1659 1802 188 + 0 ID=cds1_00003;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 203 250 + -NW_017366533.1 ALN cds 2061 2214 200 + 0 ID=cds1_00004;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 251 301 + -NW_017366533.1 ALN cds 2487 2701 311 + 2 ID=cds1_00005;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 302 374 + -NW_017366533.1 ALN cds 2783 3313 608 + 0 ID=cds1_00006;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 375 549 + -NW_017366533.1 ALN gene 5314 8701 1365 - . ID=gene00002;Name=NW_017366533.1_2 -NW_017366533.1 ALN mRNA 5314 8701 1365 - . ID=mRNA2_00001;Parent=gene00002;Name=NW_017366533.1_2 -NW_017366533.1 ALN cds 8528 8701 267 - 0 ID=cds2_00001;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 17 74 + -NW_017366533.1 ALN cds 7566 7706 184 - 0 ID=cds2_00002;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 75 121 + -NW_017366533.1 ALN cds 7219 7357 242 - 0 ID=cds2_00003;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 122 167 + -NW_017366533.1 ALN cds 6929 7041 177 - 2 ID=cds2_00004;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 168 205 + -NW_017366533.1 ALN cds 6595 6828 385 - 0 ID=cds2_00005;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 206 284 + -NW_017366533.1 ALN cds 6288 6394 178 - 0 ID=cds2_00006;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 285 320 + -NW_017366533.1 ALN cds 5314 5407 173 - 1 ID=cds2_00007;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 321 351 + -NW_017366533.1 ALN gene 10702 20056 995 + . ID=gene00003;Name=NW_017366533.1_3 -NW_017366533.1 ALN mRNA 10702 20056 995 + . ID=mRNA3_00001;Parent=gene00003;Name=NW_017366533.1_3 -NW_017366533.1 ALN cds 10702 10827 208 + 0 ID=cds3_00001;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 31 72 + -NW_017366533.1 ALN cds 15802 15903 235 + 0 ID=cds3_00002;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 73 106 + -NW_017366533.1 ALN cds 17604 17706 205 + 0 ID=cds3_00003;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 107 140 + -NW_017366533.1 ALN cds 17792 17881 191 + 2 ID=cds3_00004;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 141 170 + -NW_017366533.1 ALN cds 18376 18542 309 + 2 ID=cds3_00005;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 171 226 + -NW_017366533.1 ALN cds 20021 20056 71 + 0 ID=cds3_00006;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 227 238 + -NW_017366533.1 ALN gene 22041 32752 5385 + . ID=gene00004;Name=NW_017366533.1_4 -NW_017366533.1 ALN mRNA 22041 32752 5385 + . ID=mRNA4_00001;Parent=gene00004;Name=NW_017366533.1_4 -NW_017366533.1 ALN cds 22041 22827 965 + 0 ID=cds4_00001;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 53 308 + -NW_017366533.1 ALN cds 23837 24082 264 + 2 ID=cds4_00002;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 309 387 + -NW_017366533.1 ALN cds 24229 24392 270 + 2 ID=cds4_00003;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 388 442 + -NW_017366533.1 ALN cds 24476 24637 280 + 0 ID=cds4_00004;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 443 496 + -NW_017366533.1 ALN cds 24718 24791 127 + 0 ID=cds4_00005;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 497 521 + -NW_017366533.1 ALN cds 25910 26093 358 + 1 ID=cds4_00006;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 522 582 + -NW_017366533.1 ALN cds 26306 26539 433 + 0 ID=cds4_00007;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 583 660 + -NW_017366533.1 ALN cds 27205 27296 152 + 0 ID=cds4_00008;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 661 691 + -NW_017366533.1 ALN cds 27383 27510 235 + 1 ID=cds4_00009;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 692 733 + -NW_017366533.1 ALN cds 27607 27761 272 + 2 ID=cds4_00010;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 734 785 + -NW_017366533.1 ALN cds 28374 28508 266 + 0 ID=cds4_00011;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 786 830 + -NW_017366533.1 ALN cds 28614 28808 350 + 0 ID=cds4_00012;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 831 895 + -NW_017366533.1 ALN cds 29603 29785 322 + 0 ID=cds4_00013;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 896 956 + -NW_017366533.1 ALN cds 29869 30052 264 + 0 ID=cds4_00014;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 957 1023 + -NW_017366533.1 ALN cds 30791 30931 239 + 2 ID=cds4_00015;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1024 1070 + -NW_017366533.1 ALN cds 31017 31159 249 + 2 ID=cds4_00016;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1071 1118 + -NW_017366533.1 ALN cds 31243 31446 346 + 0 ID=cds4_00017;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1119 1186 + -NW_017366533.1 ALN cds 31534 31651 205 + 0 ID=cds4_00018;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1187 1225 + -NW_017366533.1 ALN cds 32253 32355 197 + 2 ID=cds4_00019;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1226 1260 + -NW_017366533.1 ALN cds 32488 32752 322 + 1 ID=cds4_00020;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1261 1348 + -NW_017366533.1 ALN gene 34753 39583 2351 + . ID=gene00005;Name=NW_017366533.1_5 -NW_017366533.1 ALN mRNA 34753 39583 2351 + . ID=mRNA5_00001;Parent=gene00005;Name=NW_017366533.1_5 -NW_017366533.1 ALN cds 34753 34872 272 + 0 ID=cds5_00001;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 1 40 + -NW_017366533.1 ALN cds 35722 35874 297 + 0 ID=cds5_00002;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 41 91 + -NW_017366533.1 ALN cds 35986 36078 203 + 0 ID=cds5_00003;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 92 122 + -NW_017366533.1 ALN cds 36220 36285 147 + 0 ID=cds5_00004;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 123 144 + -NW_017366533.1 ALN cds 36706 36831 249 + 0 ID=cds5_00005;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 145 186 + -NW_017366533.1 ALN cds 37166 37247 172 + 0 ID=cds5_00006;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 187 213 + -NW_017366533.1 ALN cds 37677 37768 188 + 2 ID=cds5_00007;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 214 244 + -NW_017366533.1 ALN cds 37884 38017 272 + 0 ID=cds5_00008;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 245 289 + -NW_017366533.1 ALN cds 38109 38214 215 + 1 ID=cds5_00009;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 290 324 + -NW_017366533.1 ALN cds 38546 38704 359 + 0 ID=cds5_00010;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 325 377 + -NW_017366533.1 ALN cds 38803 38876 166 + 0 ID=cds5_00011;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 378 402 + -NW_017366533.1 ALN cds 39463 39583 241 + 1 ID=cds5_00012;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 403 442 + +NW_017366533.1 ALN gene 907 3312 1278 + . ID=gene00001;Name=NW_017366533.1_1 +NW_017366533.1 ALN mRNA 907 3312 1278 + . ID=mRNA1_00001;Parent=gene00001;Name=NW_017366533.1_1 +NW_017366533.1 ALN CDS 907 1292 -49 + 0 ID=cds1_00001;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 101 152 + +NW_017366533.1 ALN CDS 1402 1550 207 + 2 ID=cds1_00002;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 153 202 + +NW_017366533.1 ALN CDS 1658 1801 188 + 0 ID=cds1_00003;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 203 250 + +NW_017366533.1 ALN CDS 2060 2213 200 + 0 ID=cds1_00004;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 251 301 + +NW_017366533.1 ALN CDS 2486 2700 311 + 2 ID=cds1_00005;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 302 374 + +NW_017366533.1 ALN CDS 2782 3312 608 + 0 ID=cds1_00006;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 375 549 + +NW_017366533.1 ALN gene 5313 8700 1365 - . ID=gene00002;Name=NW_017366533.1_2 +NW_017366533.1 ALN mRNA 5313 8700 1365 - . ID=mRNA2_00001;Parent=gene00002;Name=NW_017366533.1_2 +NW_017366533.1 ALN CDS 8527 8700 267 - 0 ID=cds2_00001;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 17 74 + +NW_017366533.1 ALN CDS 7565 7705 184 - 0 ID=cds2_00002;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 75 121 + +NW_017366533.1 ALN CDS 7218 7356 242 - 0 ID=cds2_00003;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 122 167 + +NW_017366533.1 ALN CDS 6928 7040 177 - 2 ID=cds2_00004;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 168 205 + +NW_017366533.1 ALN CDS 6594 6827 385 - 0 ID=cds2_00005;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 206 284 + +NW_017366533.1 ALN CDS 6287 6393 178 - 0 ID=cds2_00006;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 285 320 + +NW_017366533.1 ALN CDS 5313 5406 173 - 1 ID=cds2_00007;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 321 351 + +NW_017366533.1 ALN gene 10701 20055 995 + . ID=gene00003;Name=NW_017366533.1_3 +NW_017366533.1 ALN mRNA 10701 20055 995 + . ID=mRNA3_00001;Parent=gene00003;Name=NW_017366533.1_3 +NW_017366533.1 ALN CDS 10701 10826 208 + 0 ID=cds3_00001;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 31 72 + +NW_017366533.1 ALN CDS 15801 15902 235 + 0 ID=cds3_00002;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 73 106 + +NW_017366533.1 ALN CDS 17603 17705 205 + 0 ID=cds3_00003;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 107 140 + +NW_017366533.1 ALN CDS 17791 17880 191 + 2 ID=cds3_00004;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 141 170 + +NW_017366533.1 ALN CDS 18375 18541 309 + 2 ID=cds3_00005;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 171 226 + +NW_017366533.1 ALN CDS 20020 20055 71 + 0 ID=cds3_00006;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 227 238 + +NW_017366533.1 ALN gene 22040 32751 5385 + . ID=gene00004;Name=NW_017366533.1_4 +NW_017366533.1 ALN mRNA 22040 32751 5385 + . ID=mRNA4_00001;Parent=gene00004;Name=NW_017366533.1_4 +NW_017366533.1 ALN CDS 22040 22826 965 + 0 ID=cds4_00001;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 53 308 + +NW_017366533.1 ALN CDS 23836 24081 264 + 2 ID=cds4_00002;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 309 387 + +NW_017366533.1 ALN CDS 24228 24391 270 + 2 ID=cds4_00003;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 388 442 + +NW_017366533.1 ALN CDS 24475 24636 280 + 0 ID=cds4_00004;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 443 496 + +NW_017366533.1 ALN CDS 24717 24790 127 + 0 ID=cds4_00005;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 497 521 + +NW_017366533.1 ALN CDS 25909 26092 358 + 1 ID=cds4_00006;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 522 582 + +NW_017366533.1 ALN CDS 26305 26538 433 + 0 ID=cds4_00007;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 583 660 + +NW_017366533.1 ALN CDS 27204 27295 152 + 0 ID=cds4_00008;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 661 691 + +NW_017366533.1 ALN CDS 27382 27509 235 + 1 ID=cds4_00009;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 692 733 + +NW_017366533.1 ALN CDS 27606 27760 272 + 2 ID=cds4_00010;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 734 785 + +NW_017366533.1 ALN CDS 28373 28507 266 + 0 ID=cds4_00011;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 786 830 + +NW_017366533.1 ALN CDS 28613 28807 350 + 0 ID=cds4_00012;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 831 895 + +NW_017366533.1 ALN CDS 29602 29784 322 + 0 ID=cds4_00013;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 896 956 + +NW_017366533.1 ALN CDS 29868 30051 264 + 0 ID=cds4_00014;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 957 1023 + +NW_017366533.1 ALN CDS 30790 30930 239 + 2 ID=cds4_00015;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1024 1070 + +NW_017366533.1 ALN CDS 31016 31158 249 + 2 ID=cds4_00016;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1071 1118 + +NW_017366533.1 ALN CDS 31242 31445 346 + 0 ID=cds4_00017;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1119 1186 + +NW_017366533.1 ALN CDS 31533 31650 205 + 0 ID=cds4_00018;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1187 1225 + +NW_017366533.1 ALN CDS 32252 32354 197 + 2 ID=cds4_00019;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1226 1260 + +NW_017366533.1 ALN CDS 32487 32751 322 + 1 ID=cds4_00020;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1261 1348 + +NW_017366533.1 ALN gene 34752 39582 2351 + . ID=gene00005;Name=NW_017366533.1_5 +NW_017366533.1 ALN mRNA 34752 39582 2351 + . ID=mRNA5_00001;Parent=gene00005;Name=NW_017366533.1_5 +NW_017366533.1 ALN CDS 34752 34871 272 + 0 ID=cds5_00001;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 1 40 + +NW_017366533.1 ALN CDS 35721 35873 297 + 0 ID=cds5_00002;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 41 91 + +NW_017366533.1 ALN CDS 35985 36077 203 + 0 ID=cds5_00003;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 92 122 + +NW_017366533.1 ALN CDS 36219 36284 147 + 0 ID=cds5_00004;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 123 144 + +NW_017366533.1 ALN CDS 36705 36830 249 + 0 ID=cds5_00005;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 145 186 + +NW_017366533.1 ALN CDS 37165 37246 172 + 0 ID=cds5_00006;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 187 213 + +NW_017366533.1 ALN CDS 37676 37767 188 + 2 ID=cds5_00007;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 214 244 + +NW_017366533.1 ALN CDS 37883 38016 272 + 0 ID=cds5_00008;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 245 289 + +NW_017366533.1 ALN CDS 38108 38213 215 + 1 ID=cds5_00009;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 290 324 + +NW_017366533.1 ALN CDS 38545 38703 359 + 0 ID=cds5_00010;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 325 377 + +NW_017366533.1 ALN CDS 38802 38875 166 + 0 ID=cds5_00011;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 378 402 + +NW_017366533.1 ALN CDS 39462 39582 241 + 1 ID=cds5_00012;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 403 442 +
--- a/test-data/spaln_out_no_st.gff3 Thu Oct 20 09:11:54 2022 +0000 +++ b/test-data/spaln_out_no_st.gff3 Thu Oct 20 09:38:33 2022 +0000 @@ -1,64 +1,64 @@ ##gff-version 3 ##sequence-region NW_017366533.1 906 39583 -NW_017366533.1 ALN gene 908 3313 1336 + . ID=gene00001;Name=NW_017366533.1_1 -NW_017366533.1 ALN mRNA 908 3313 1336 + . ID=mRNA1_00001;Parent=gene00001;Name=NW_017366533.1_1 -NW_017366533.1 ALN cds 908 1293 -48 + 0 ID=cds1_00001;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 101 152 + -NW_017366533.1 ALN cds 1403 1551 203 + 2 ID=cds1_00002;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 153 202 + -NW_017366533.1 ALN cds 1659 1802 187 + 0 ID=cds1_00003;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 203 250 + -NW_017366533.1 ALN cds 2061 2214 199 + 0 ID=cds1_00004;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 251 301 + -NW_017366533.1 ALN cds 2487 2701 307 + 2 ID=cds1_00005;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 302 374 + -NW_017366533.1 ALN cds 2783 3313 609 + 0 ID=cds1_00006;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 375 549 + -NW_017366533.1 ALN gene 5314 8701 1427 - . ID=gene00002;Name=NW_017366533.1_2 -NW_017366533.1 ALN mRNA 5314 8701 1427 - . ID=mRNA2_00001;Parent=gene00002;Name=NW_017366533.1_2 -NW_017366533.1 ALN cds 8528 8701 268 - 0 ID=cds2_00001;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 17 74 + -NW_017366533.1 ALN cds 7566 7706 181 - 0 ID=cds2_00002;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 75 121 + -NW_017366533.1 ALN cds 7219 7357 238 - 0 ID=cds2_00003;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 122 167 + -NW_017366533.1 ALN cds 6929 7041 176 - 2 ID=cds2_00004;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 168 205 + -NW_017366533.1 ALN cds 6595 6828 385 - 0 ID=cds2_00005;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 206 284 + -NW_017366533.1 ALN cds 6288 6394 171 - 0 ID=cds2_00006;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 285 320 + -NW_017366533.1 ALN cds 5314 5407 170 - 1 ID=cds2_00007;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 321 351 + -NW_017366533.1 ALN gene 10702 20056 1034 + . ID=gene00003;Name=NW_017366533.1_3 -NW_017366533.1 ALN mRNA 10702 20056 1034 + . ID=mRNA3_00001;Parent=gene00003;Name=NW_017366533.1_3 -NW_017366533.1 ALN cds 10702 10827 207 + 0 ID=cds3_00001;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 31 72 + -NW_017366533.1 ALN cds 15802 15903 228 + 0 ID=cds3_00002;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 73 106 + -NW_017366533.1 ALN cds 17604 17706 204 + 0 ID=cds3_00003;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 107 140 + -NW_017366533.1 ALN cds 17792 17881 186 + 2 ID=cds3_00004;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 141 170 + -NW_017366533.1 ALN cds 18376 18542 305 + 2 ID=cds3_00005;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 171 226 + -NW_017366533.1 ALN cds 20021 20056 70 + 0 ID=cds3_00006;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 227 238 + -NW_017366533.1 ALN gene 22041 32752 5582 + . ID=gene00004;Name=NW_017366533.1_4 -NW_017366533.1 ALN mRNA 22041 32752 5582 + . ID=mRNA4_00001;Parent=gene00004;Name=NW_017366533.1_4 -NW_017366533.1 ALN cds 22041 22827 964 + 0 ID=cds4_00001;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 53 308 + -NW_017366533.1 ALN cds 23837 24082 261 + 2 ID=cds4_00002;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 309 387 + -NW_017366533.1 ALN cds 24229 24392 271 + 2 ID=cds4_00003;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 388 442 + -NW_017366533.1 ALN cds 24476 24637 281 + 0 ID=cds4_00004;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 443 496 + -NW_017366533.1 ALN cds 24718 24791 125 + 0 ID=cds4_00005;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 497 521 + -NW_017366533.1 ALN cds 25910 26093 355 + 1 ID=cds4_00006;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 522 582 + -NW_017366533.1 ALN cds 26306 26539 430 + 0 ID=cds4_00007;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 583 660 + -NW_017366533.1 ALN cds 27205 27296 147 + 0 ID=cds4_00008;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 661 691 + -NW_017366533.1 ALN cds 27383 27510 233 + 1 ID=cds4_00009;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 692 733 + -NW_017366533.1 ALN cds 27607 27761 266 + 2 ID=cds4_00010;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 734 785 + -NW_017366533.1 ALN cds 28374 28508 264 + 0 ID=cds4_00011;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 786 830 + -NW_017366533.1 ALN cds 28614 28808 349 + 0 ID=cds4_00012;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 831 895 + -NW_017366533.1 ALN cds 29603 29785 318 + 0 ID=cds4_00013;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 896 956 + -NW_017366533.1 ALN cds 29869 30052 261 + 0 ID=cds4_00014;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 957 1025 + -NW_017366533.1 ALN cds 30744 30758 27 + 2 ID=cds4_00015;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1026 1030 + -NW_017366533.1 ALN cds 30812 30931 223 + 2 ID=cds4_00016;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1031 1070 + -NW_017366533.1 ALN cds 31017 31159 246 + 2 ID=cds4_00017;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1071 1118 + -NW_017366533.1 ALN cds 31243 31446 347 + 0 ID=cds4_00018;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1119 1186 + -NW_017366533.1 ALN cds 31534 31651 209 + 0 ID=cds4_00019;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1187 1225 + -NW_017366533.1 ALN cds 32253 32355 193 + 2 ID=cds4_00020;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1226 1260 + -NW_017366533.1 ALN cds 32488 32752 322 + 1 ID=cds4_00021;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1261 1348 + -NW_017366533.1 ALN gene 34753 39583 2466 + . ID=gene00005;Name=NW_017366533.1_5 -NW_017366533.1 ALN mRNA 34753 39583 2466 + . ID=mRNA5_00001;Parent=gene00005;Name=NW_017366533.1_5 -NW_017366533.1 ALN cds 34753 34872 273 + 0 ID=cds5_00001;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 1 40 + -NW_017366533.1 ALN cds 35722 35874 297 + 0 ID=cds5_00002;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 41 91 + -NW_017366533.1 ALN cds 35986 36078 203 + 0 ID=cds5_00003;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 92 122 + -NW_017366533.1 ALN cds 36220 36285 145 + 0 ID=cds5_00004;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 123 144 + -NW_017366533.1 ALN cds 36706 36831 248 + 0 ID=cds5_00005;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 145 186 + -NW_017366533.1 ALN cds 37166 37247 169 + 0 ID=cds5_00006;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 187 213 + -NW_017366533.1 ALN cds 37677 37768 187 + 2 ID=cds5_00007;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 214 244 + -NW_017366533.1 ALN cds 37884 38017 270 + 0 ID=cds5_00008;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 245 289 + -NW_017366533.1 ALN cds 38109 38214 210 + 1 ID=cds5_00009;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 290 324 + -NW_017366533.1 ALN cds 38546 38704 354 + 0 ID=cds5_00010;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 325 377 + -NW_017366533.1 ALN cds 38803 38876 164 + 0 ID=cds5_00011;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 378 402 + -NW_017366533.1 ALN cds 39463 39583 235 + 1 ID=cds5_00012;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 403 442 + +NW_017366533.1 ALN gene 907 3312 1336 + . ID=gene00001;Name=NW_017366533.1_1 +NW_017366533.1 ALN mRNA 907 3312 1336 + . ID=mRNA1_00001;Parent=gene00001;Name=NW_017366533.1_1 +NW_017366533.1 ALN CDS 907 1292 -48 + 0 ID=cds1_00001;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 101 152 + +NW_017366533.1 ALN CDS 1402 1550 203 + 2 ID=cds1_00002;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 153 202 + +NW_017366533.1 ALN CDS 1658 1801 187 + 0 ID=cds1_00003;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 203 250 + +NW_017366533.1 ALN CDS 2060 2213 199 + 0 ID=cds1_00004;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 251 301 + +NW_017366533.1 ALN CDS 2486 2700 307 + 2 ID=cds1_00005;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 302 374 + +NW_017366533.1 ALN CDS 2782 3312 609 + 0 ID=cds1_00006;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 375 549 + +NW_017366533.1 ALN gene 5313 8700 1427 - . ID=gene00002;Name=NW_017366533.1_2 +NW_017366533.1 ALN mRNA 5313 8700 1427 - . ID=mRNA2_00001;Parent=gene00002;Name=NW_017366533.1_2 +NW_017366533.1 ALN CDS 8527 8700 268 - 0 ID=cds2_00001;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 17 74 + +NW_017366533.1 ALN CDS 7565 7705 181 - 0 ID=cds2_00002;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 75 121 + +NW_017366533.1 ALN CDS 7218 7356 238 - 0 ID=cds2_00003;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 122 167 + +NW_017366533.1 ALN CDS 6928 7040 176 - 2 ID=cds2_00004;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 168 205 + +NW_017366533.1 ALN CDS 6594 6827 385 - 0 ID=cds2_00005;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 206 284 + +NW_017366533.1 ALN CDS 6287 6393 171 - 0 ID=cds2_00006;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 285 320 + +NW_017366533.1 ALN CDS 5313 5406 170 - 1 ID=cds2_00007;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 321 351 + +NW_017366533.1 ALN gene 10701 20055 1034 + . ID=gene00003;Name=NW_017366533.1_3 +NW_017366533.1 ALN mRNA 10701 20055 1034 + . ID=mRNA3_00001;Parent=gene00003;Name=NW_017366533.1_3 +NW_017366533.1 ALN CDS 10701 10826 207 + 0 ID=cds3_00001;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 31 72 + +NW_017366533.1 ALN CDS 15801 15902 228 + 0 ID=cds3_00002;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 73 106 + +NW_017366533.1 ALN CDS 17603 17705 204 + 0 ID=cds3_00003;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 107 140 + +NW_017366533.1 ALN CDS 17791 17880 186 + 2 ID=cds3_00004;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 141 170 + +NW_017366533.1 ALN CDS 18375 18541 305 + 2 ID=cds3_00005;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 171 226 + +NW_017366533.1 ALN CDS 20020 20055 70 + 0 ID=cds3_00006;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 227 238 + +NW_017366533.1 ALN gene 22040 32751 5582 + . ID=gene00004;Name=NW_017366533.1_4 +NW_017366533.1 ALN mRNA 22040 32751 5582 + . ID=mRNA4_00001;Parent=gene00004;Name=NW_017366533.1_4 +NW_017366533.1 ALN CDS 22040 22826 964 + 0 ID=cds4_00001;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 53 308 + +NW_017366533.1 ALN CDS 23836 24081 261 + 2 ID=cds4_00002;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 309 387 + +NW_017366533.1 ALN CDS 24228 24391 271 + 2 ID=cds4_00003;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 388 442 + +NW_017366533.1 ALN CDS 24475 24636 281 + 0 ID=cds4_00004;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 443 496 + +NW_017366533.1 ALN CDS 24717 24790 125 + 0 ID=cds4_00005;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 497 521 + +NW_017366533.1 ALN CDS 25909 26092 355 + 1 ID=cds4_00006;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 522 582 + +NW_017366533.1 ALN CDS 26305 26538 430 + 0 ID=cds4_00007;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 583 660 + +NW_017366533.1 ALN CDS 27204 27295 147 + 0 ID=cds4_00008;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 661 691 + +NW_017366533.1 ALN CDS 27382 27509 233 + 1 ID=cds4_00009;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 692 733 + +NW_017366533.1 ALN CDS 27606 27760 266 + 2 ID=cds4_00010;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 734 785 + +NW_017366533.1 ALN CDS 28373 28507 264 + 0 ID=cds4_00011;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 786 830 + +NW_017366533.1 ALN CDS 28613 28807 349 + 0 ID=cds4_00012;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 831 895 + +NW_017366533.1 ALN CDS 29602 29784 318 + 0 ID=cds4_00013;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 896 956 + +NW_017366533.1 ALN CDS 29868 30051 261 + 0 ID=cds4_00014;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 957 1025 + +NW_017366533.1 ALN CDS 30743 30757 27 + 2 ID=cds4_00015;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1026 1030 + +NW_017366533.1 ALN CDS 30811 30930 223 + 2 ID=cds4_00016;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1031 1070 + +NW_017366533.1 ALN CDS 31016 31158 246 + 2 ID=cds4_00017;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1071 1118 + +NW_017366533.1 ALN CDS 31242 31445 347 + 0 ID=cds4_00018;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1119 1186 + +NW_017366533.1 ALN CDS 31533 31650 209 + 0 ID=cds4_00019;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1187 1225 + +NW_017366533.1 ALN CDS 32252 32354 193 + 2 ID=cds4_00020;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1226 1260 + +NW_017366533.1 ALN CDS 32487 32751 322 + 1 ID=cds4_00021;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1261 1348 + +NW_017366533.1 ALN gene 34752 39582 2466 + . ID=gene00005;Name=NW_017366533.1_5 +NW_017366533.1 ALN mRNA 34752 39582 2466 + . ID=mRNA5_00001;Parent=gene00005;Name=NW_017366533.1_5 +NW_017366533.1 ALN CDS 34752 34871 273 + 0 ID=cds5_00001;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 1 40 + +NW_017366533.1 ALN CDS 35721 35873 297 + 0 ID=cds5_00002;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 41 91 + +NW_017366533.1 ALN CDS 35985 36077 203 + 0 ID=cds5_00003;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 92 122 + +NW_017366533.1 ALN CDS 36219 36284 145 + 0 ID=cds5_00004;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 123 144 + +NW_017366533.1 ALN CDS 36705 36830 248 + 0 ID=cds5_00005;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 145 186 + +NW_017366533.1 ALN CDS 37165 37246 169 + 0 ID=cds5_00006;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 187 213 + +NW_017366533.1 ALN CDS 37676 37767 187 + 2 ID=cds5_00007;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 214 244 + +NW_017366533.1 ALN CDS 37883 38016 270 + 0 ID=cds5_00008;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 245 289 + +NW_017366533.1 ALN CDS 38108 38213 210 + 1 ID=cds5_00009;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 290 324 + +NW_017366533.1 ALN CDS 38545 38703 354 + 0 ID=cds5_00010;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 325 377 + +NW_017366533.1 ALN CDS 38802 38875 164 + 0 ID=cds5_00011;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 378 402 + +NW_017366533.1 ALN CDS 39462 39582 235 + 1 ID=cds5_00012;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 403 442 +