Mercurial > repos > sanbi-uwc > lukasa
view test-data/spaln_out.gff3 @ 9:b5fd7283e53d draft default tip
planemo upload for repository https://github.com/pvanheus/lukasa commit 9dbdb6595a6ac364ae66a892b88958adc2d35bb6-dirty
| author | sanbi-uwc |
|---|---|
| date | Wed, 07 Dec 2022 07:37:19 +0000 |
| parents | 715a727e3b65 |
| children |
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##gff-version 3 ##sequence-region NW_017366533.1 906 39583 NW_017366533.1 ALN gene 907 3312 1278 + . ID=gene00001;Name=NW_017366533.1_1 NW_017366533.1 ALN mRNA 907 3312 1278 + . ID=mRNA1_00001;Parent=gene00001;Name=NW_017366533.1_1 NW_017366533.1 ALN CDS 907 1292 -49 + 0 ID=cds1_00001;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 101 152 + NW_017366533.1 ALN CDS 1402 1550 207 + 2 ID=cds1_00002;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 153 202 + NW_017366533.1 ALN CDS 1658 1801 188 + 0 ID=cds1_00003;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 203 250 + NW_017366533.1 ALN CDS 2060 2213 200 + 0 ID=cds1_00004;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 251 301 + NW_017366533.1 ALN CDS 2486 2700 311 + 2 ID=cds1_00005;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 302 374 + NW_017366533.1 ALN CDS 2782 3312 608 + 0 ID=cds1_00006;Parent=mRNA1_00001;Name=NW_017366533.1_1;Target=XP_008319618.1 375 549 + NW_017366533.1 ALN gene 5313 8700 1365 - . ID=gene00002;Name=NW_017366533.1_2 NW_017366533.1 ALN mRNA 5313 8700 1365 - . ID=mRNA2_00001;Parent=gene00002;Name=NW_017366533.1_2 NW_017366533.1 ALN CDS 8527 8700 267 - 0 ID=cds2_00001;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 17 74 + NW_017366533.1 ALN CDS 7565 7705 184 - 0 ID=cds2_00002;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 75 121 + NW_017366533.1 ALN CDS 7218 7356 242 - 0 ID=cds2_00003;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 122 167 + NW_017366533.1 ALN CDS 6928 7040 177 - 2 ID=cds2_00004;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 168 205 + NW_017366533.1 ALN CDS 6594 6827 385 - 0 ID=cds2_00005;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 206 284 + NW_017366533.1 ALN CDS 6287 6393 178 - 0 ID=cds2_00006;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 285 320 + NW_017366533.1 ALN CDS 5313 5406 173 - 1 ID=cds2_00007;Parent=mRNA2_00001;Name=NW_017366533.1_2;Target=XP_008322079.1 321 351 + NW_017366533.1 ALN gene 10701 20055 995 + . ID=gene00003;Name=NW_017366533.1_3 NW_017366533.1 ALN mRNA 10701 20055 995 + . ID=mRNA3_00001;Parent=gene00003;Name=NW_017366533.1_3 NW_017366533.1 ALN CDS 10701 10826 208 + 0 ID=cds3_00001;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 31 72 + NW_017366533.1 ALN CDS 15801 15902 235 + 0 ID=cds3_00002;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 73 106 + NW_017366533.1 ALN CDS 17603 17705 205 + 0 ID=cds3_00003;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 107 140 + NW_017366533.1 ALN CDS 17791 17880 191 + 2 ID=cds3_00004;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 141 170 + NW_017366533.1 ALN CDS 18375 18541 309 + 2 ID=cds3_00005;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 171 226 + NW_017366533.1 ALN CDS 20020 20055 71 + 0 ID=cds3_00006;Parent=mRNA3_00001;Name=NW_017366533.1_3;Target=XP_008322769.1 227 238 + NW_017366533.1 ALN gene 22040 32751 5385 + . ID=gene00004;Name=NW_017366533.1_4 NW_017366533.1 ALN mRNA 22040 32751 5385 + . ID=mRNA4_00001;Parent=gene00004;Name=NW_017366533.1_4 NW_017366533.1 ALN CDS 22040 22826 965 + 0 ID=cds4_00001;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 53 308 + NW_017366533.1 ALN CDS 23836 24081 264 + 2 ID=cds4_00002;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 309 387 + NW_017366533.1 ALN CDS 24228 24391 270 + 2 ID=cds4_00003;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 388 442 + NW_017366533.1 ALN CDS 24475 24636 280 + 0 ID=cds4_00004;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 443 496 + NW_017366533.1 ALN CDS 24717 24790 127 + 0 ID=cds4_00005;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 497 521 + NW_017366533.1 ALN CDS 25909 26092 358 + 1 ID=cds4_00006;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 522 582 + NW_017366533.1 ALN CDS 26305 26538 433 + 0 ID=cds4_00007;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 583 660 + NW_017366533.1 ALN CDS 27204 27295 152 + 0 ID=cds4_00008;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 661 691 + NW_017366533.1 ALN CDS 27382 27509 235 + 1 ID=cds4_00009;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 692 733 + NW_017366533.1 ALN CDS 27606 27760 272 + 2 ID=cds4_00010;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 734 785 + NW_017366533.1 ALN CDS 28373 28507 266 + 0 ID=cds4_00011;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 786 830 + NW_017366533.1 ALN CDS 28613 28807 350 + 0 ID=cds4_00012;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 831 895 + NW_017366533.1 ALN CDS 29602 29784 322 + 0 ID=cds4_00013;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 896 956 + NW_017366533.1 ALN CDS 29868 30051 264 + 0 ID=cds4_00014;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 957 1023 + NW_017366533.1 ALN CDS 30790 30930 239 + 2 ID=cds4_00015;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1024 1070 + NW_017366533.1 ALN CDS 31016 31158 249 + 2 ID=cds4_00016;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1071 1118 + NW_017366533.1 ALN CDS 31242 31445 346 + 0 ID=cds4_00017;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1119 1186 + NW_017366533.1 ALN CDS 31533 31650 205 + 0 ID=cds4_00018;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1187 1225 + NW_017366533.1 ALN CDS 32252 32354 197 + 2 ID=cds4_00019;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1226 1260 + NW_017366533.1 ALN CDS 32487 32751 322 + 1 ID=cds4_00020;Parent=mRNA4_00001;Name=NW_017366533.1_4;Target=XP_008322771.1 1261 1348 + NW_017366533.1 ALN gene 34752 39582 2351 + . ID=gene00005;Name=NW_017366533.1_5 NW_017366533.1 ALN mRNA 34752 39582 2351 + . ID=mRNA5_00001;Parent=gene00005;Name=NW_017366533.1_5 NW_017366533.1 ALN CDS 34752 34871 272 + 0 ID=cds5_00001;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 1 40 + NW_017366533.1 ALN CDS 35721 35873 297 + 0 ID=cds5_00002;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 41 91 + NW_017366533.1 ALN CDS 35985 36077 203 + 0 ID=cds5_00003;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 92 122 + NW_017366533.1 ALN CDS 36219 36284 147 + 0 ID=cds5_00004;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 123 144 + NW_017366533.1 ALN CDS 36705 36830 249 + 0 ID=cds5_00005;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 145 186 + NW_017366533.1 ALN CDS 37165 37246 172 + 0 ID=cds5_00006;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 187 213 + NW_017366533.1 ALN CDS 37676 37767 188 + 2 ID=cds5_00007;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 214 244 + NW_017366533.1 ALN CDS 37883 38016 272 + 0 ID=cds5_00008;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 245 289 + NW_017366533.1 ALN CDS 38108 38213 215 + 1 ID=cds5_00009;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 290 324 + NW_017366533.1 ALN CDS 38545 38703 359 + 0 ID=cds5_00010;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 325 377 + NW_017366533.1 ALN CDS 38802 38875 166 + 0 ID=cds5_00011;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 378 402 + NW_017366533.1 ALN CDS 39462 39582 241 + 1 ID=cds5_00012;Parent=mRNA5_00001;Name=NW_017366533.1_5;Target=XP_008322772.1 403 442 +