Mercurial > repos > sanbi-uwc > data_manager_shapeit_reference
diff data_manager/shapeit_ref.xml @ 1:52f0767fe68d draft
planemo upload for repository https://github.com/pvanheus/data_manager_shapeit_reference commit b42d6cc8358088a50bc4463367c740c1e9dc71d8
author | sanbi-uwc |
---|---|
date | Thu, 13 Sep 2018 06:25:32 -0400 |
parents | f86c65c60056 |
children | 495439e68fca |
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--- a/data_manager/shapeit_ref.xml Tue Sep 11 10:39:38 2018 -0400 +++ b/data_manager/shapeit_ref.xml Thu Sep 13 06:25:32 2018 -0400 @@ -1,17 +1,19 @@ -<tool id="shapeit_reference_manager" name="SHAPEIT reference data path manager" tool_type="manage_data" version="0.0.1"> +<tool id="shapeit_reference_manager" name="SHAPEIT reference data path manager" tool_type="manage_data" version="0.0.2"> <command detect_errors="aggressive"><![CDATA[ python $__tool_directory__/shapeit_ref.py '${key}' '${description}' '${path}' - '${prefix}' + '${reference_prefix}' + '${map_prefix}' '${output_file}' ]]></command>> <inputs> <param name="key" type="text" label="Short key to identify this reference set (no spaces)" /> <param name="description" type="text" label="Description of the reference data" /> <param name="path" type="text" label="Filesystem path to directory containing this reference set" /> - <param name="prefix" type="text" label="Filename prefix for files in this reference set" /> + <param name="reference_prefix" type="text" label="Filename prefix for the reference (.hap / .legend / .sample) files" /> + <param name="map_prefix" type="text" label="Filename prefix for map files in this reference set" /> </inputs> <outputs> <data name="output_file" format="data_manager_json" />