Mercurial > repos > sanbi-uwc > data_manager_primer_scheme_bedfiles

annotate data_manager_conf.xml @ 0:00ed379c9df1 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
author sanbi-uwc
date Sat, 18 Apr 2020 15:21:47 +0000
parents
children e5552d150daf
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0
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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1 <?xml version="1.0"?>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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2 <data_managers>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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3 <data_manager tool_file="data_manager/install_primer_scheme_bedfiles.xml" id="data_manager_primer_scheme_bedfiles">
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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4 <data_table name="primer_scheme_bedfiles">
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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5 <output>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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6 <column name="value" />
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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7 <column name="description" />
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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8 <column name="path" output_ref="output_file" >
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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9 <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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10 <move type="file">
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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11 <source>${path}</source>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">primer_scheme_bedfiles/#echo str($value)#.bed</target>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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13 </move>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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14 <value_translation>primer_scheme_bedfiles/#echo str($value)#.bed</value_translation>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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15 <value_translation type="function">abspath</value_translation>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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16 </column>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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17 </output>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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18 </data_table>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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19 </data_manager>
00ed379c9df1 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 88130bb7c37cca7eff6df235ba17e0ae9f11df86-dirty"
sanbi-uwc
parents:
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20 </data_managers>