Mercurial > repos > sanbi-uwc > data_manager_novoalign_license_uploader

annotate data_manager_conf.xml @ 0:0b64aa6d4214 draft

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planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
author sanbi-uwc
date Sun, 28 Feb 2016 14:51:11 -0500
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children c2002302e045
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0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
diff changeset
1 <?xml version="1.0" encoding="UTF-8" ?>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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2 <tool id="novoalign_license_uploader" name="Novo-align Licence Uploader" version="1.0">
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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3 <description>Upload a license file to Galaxy tool-data directory </description>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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4 <stdio> <exit_code range=":-1" />
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
diff changeset
5 <exit_code range="1:" />
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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6 </stdio>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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7 <command interpreter="python">
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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8 upload_novoalign_lic.py $in_file $out_file
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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9 </command>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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10 <inputs>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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11 <param format="data" name="in_file" type="data" label="Licence for the Novoalign program" />
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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12 </inputs>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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13
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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14 <outputs>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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15 <data format="tabular" name="out_file" label="Novoalign License uploader on ${in_file.name}"/>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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16 <!--<move type="file">
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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17 <source>${out_file}</source>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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18 <target base="${GALAXY_PATH}">/tool-data/${out_file}</target>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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19 </move>-->
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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20 </outputs>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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21 <help> Loading the license file for Novo-align program to the tool-data path.
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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22 </help>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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23 <citations>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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24 <citation></citation>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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25 </citations>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
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26 <tests></tests>
0b64aa6d4214 planemo upload for repository https://github.com/zipho/data_manager_novoalign_license_uploader commit fdbfeddc2f83df93d20ce1e75193bb5a8db2524a
sanbi-uwc
parents:
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27 </tool>