Mercurial > repos > sanbi-uwc > data_manager_novoalign_index_builder

changeset 10:73baf37760ce draft default tip

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planemo upload for repository https://github.com/zipho/data_manager_novoalign_index_builder commit ae5c4c9f96bd59f076312c8e3543dc48398e38b1
author sanbi-uwc
date Fri, 04 Mar 2016 07:56:53 -0500
parents aa87cfa1d6de
children
files data_manager_conf.xml
diffstat 1 files changed, 1 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager_conf.xml	Fri Mar 04 07:30:08 2016 -0500
+++ b/data_manager_conf.xml	Fri Mar 04 07:56:53 2016 -0500
@@ -7,9 +7,8 @@
                 <column name="dbkey" />
                 <column name="name" />
                 <column name="path" output_ref="out_file">
-                    <move type="file">
+                    <move type="directory" relative_symlinks="True">
                         <!-- no need to set source, gets taken from out_dir.extra_files_path -->
-                        <source>${path}</source>
                         <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/novocraft_index/${value}</target>
                     </move>
                     <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/{$dbkey}/novocraft_index/${value}/${path}</value_translation>