comparison data_manager_conf.xml @ 0:cfe6cd521835 draft

planemo upload for repository https://github.com/pvanheus/refseq_fasta_data_manager commit cfd2aa18826b938402ccfc6003f1793886001202-dirty

0:cfe6cd521835

<?xml version="1.0"?>
<data_managers>    
    <data_manager tool_file="data_manager/fetch_refseq.xml" id="fetch_genome_fetch_refseq">
        <data_table name="all_fasta">
            <output>
                <column name="value" />
                <column name="dbkey" />
                <column name="name" />
                <column name="path" output_ref="out_file" >
                    <move type="file">
                        <source>${path}</source>
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/seq/${path}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/seq/${path}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>    
</data_managers>