Mercurial > repos > sanbi-uwc > build_ctb_gene

changeset 16:b62c2af675b4 draft

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planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc.git commit 7a82ce5ab053e4b6fd00c3d9702e13609fa9a6bb
author sanbi-uwc
date Wed, 18 May 2016 10:04:16 -0400
parents e6d850bb9fb6
children eb925a043a43
files build_ctb_gene.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/build_ctb_gene.xml	Wed May 18 08:28:36 2016 -0400
+++ b/build_ctb_gene.xml	Wed May 18 10:04:16 2016 -0400
@@ -9,7 +9,7 @@
         <exit_code range="1:" />
     </stdio>
     <command interpreter="python">
-        build_ctb_gene.py --outputfile "${outputFile1}" --outputdir "${os.path.join($outputFile1.files_path,'neo4jdb')}" --input_file ${input_file} --mount_point ${neo4j_data_mount_point} --username ${db_settings.neo4j_db_username} --password ${db_settings.neo4j_db_password} --url ${db_settings.neo4j_db_url} --port ${db_settings.neo4j_db_port} &gt; ${outputFile1}
+        build_ctb_gene.py --outputdir "${os.path.join($outputFile1.files_path,'neo4jdb')}" --input_file ${input_file} --mount_point ${neo4j_data_mount_point} --username ${db_settings.neo4j_db_username} --password ${db_settings.neo4j_db_password} --url ${db_settings.neo4j_db_url} --port ${db_settings.neo4j_db_port} &gt; ${outputFile1}
     </command>
     <inputs>
         <param name="input_file" type="data" format="gff" label="Choose the GFF file" help="Specify the GFF file" optional="False" />