Mercurial > repos > sanbi-uwc > build_ctb_gene

diff build_ctb_gene.py @ 40:7338f1107f5f draft

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planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc.git commit cd22b28e722e05ba3d63c2f3b34e6bfa4a91b2a3
author sanbi-uwc
date Tue, 14 Jun 2016 07:15:56 -0400
parents 2a9a2575c8a4
children 4cc08d9558cc
line wrap: on
line diff
--- a/build_ctb_gene.py	Wed Jun 01 07:48:50 2016 -0400
+++ b/build_ctb_gene.py	Tue Jun 14 07:15:56 2016 -0400
@@ -43,7 +43,7 @@
         self.docker_instance_name = "build_ctb_gene_" + str(random.randrange(0, 1000, 2))
 
     def build_ctb_gene(self):
-        cmdline_str = "build_ctb_gene goterms {}".format(self.args.input_file)
+        cmdline_str = "goget goterms {}".format(self.args.input_file)
         cmdline_str = self.newSplit(cmdline_str)
         try:
             check_call(cmdline_str)