Mercurial > repos > ryotas > cypher_tools

diff tab2graph.xml @ 0:aa7a5cc0f59b default tip

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author ryo_tas <yamanaka@genome.rcast.u-tokyo.ac.jp>
date Tue, 30 Dec 2014 18:27:26 +0900
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tab2graph.xml	Tue Dec 30 18:27:26 2014 +0900
@@ -0,0 +1,37 @@
+<tool id="tab2graph" name="Tab-to-Graph" version="0.2">
+  <description>Converter 2</description>
+  <command interpreter="python">
+    tab2graph.py $input_file $h $output_file_n $output_file_r '$def_n' '$def_r'
+  </command>
+  <inputs>
+    <param name="input_file" type="data" format="tabular" label="Input File (tabular)"/>
+    <param name="h" label="Check to neglect the first row of the input." type="boolean" truevalue="1" falsevalue="0" checked="False"/>
+    <param name="def_n" type="text" area="true" size="10x70" label="Definition for Nodes">
+      <sanitizer>
+        <valid initial="string.printable">
+         <remove value="&apos;"/>
+        </valid>
+        <mapping initial="none">
+          <add source="&apos;" target="__sq__"/>
+        </mapping>
+      </sanitizer>
+    </param>
+    <param name="def_r" type="text" area="true" size="10x70" label="Definition for Relations">
+      <sanitizer>
+        <valid initial="string.printable">
+         <remove value="&apos;"/>
+        </valid>
+        <mapping initial="none">
+          <add source="&apos;" target="__sq__"/>
+        </mapping>
+      </sanitizer>
+    </param>
+  </inputs>
+  <outputs>
+    <data name="output_file_n" format="tabular" label="${tool.name} on ${on_string} (node)"/>
+    <data name="output_file_r" format="tabular" label="${tool.name} on ${on_string} (relation)"/>
+  </outputs>
+  <help>
+**What it does**
+  </help>
+</tool>