Mercurial > repos > rnateam > rcas
diff readme.rst @ 0:0006f650cec5 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/rcas/ commit 3b9aec9beb72407e01f4a0c5b31c17ac3f92a851
| author | rnateam |
|---|---|
| date | Thu, 13 Apr 2017 12:33:32 -0400 |
| parents | |
| children | 211a1f8c96df |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/readme.rst Thu Apr 13 12:33:32 2017 -0400 @@ -0,0 +1,16 @@ +Important notes +---------------- + +- the dependencies of the tool are handled by the conda dependency resolver + +- to install the dependencies, the galaxy administrator needs to configure to ensure the conda channels - bioconda, r, conda-forge, defaults + +- by default, the conda installation includes hg19 + +- to enable analysis for mm9, ce10, dm3, the administrator needs to separately install the relevant packages from the channel bioconda + - bioconductor-bsgenome.dmelanogaster.ucsc.dm3 + - bioconductor-bsgenome.celegans.ucsc.ce10 + - bioconductor-bsgenome.mmusculus.ucsc.mm9 + - bioconductor-org.mm.eg.db + - bioconductor-org.ce.eg.db + - bioconductor-org.dm.eg.db