comparison compalignp.xml @ 8:8ebf2202a0d1 draft default tip

Uploaded

7:eeedd1755f92

    <command>
<![CDATA[
    compalignp
        -t $rna_alignment_target
        -r $rna_alignment_reference
        $flag_verbose
    > $output
]]>
    </command>
    <inputs>
        <param format="stockholm" name="rna_alignment_target" type="data" label="Target RNA Alignment" help="(-t)" />
        <param format="stockholm" name="rna_alignment_reference" type="data" label="Reference RNA Alignment" help="(-r)" />
        <param name="flag_verbose" type="boolean" truevalue="-v" falsevalue="" label="Verbose output" help="(-v)" />
    </inputs>
    <outputs>
        <data name="output" format="txt" />
    </outputs>
    <tests>

8:8ebf2202a0d1

    <command>
<![CDATA[
    compalignp
        -t $rna_alignment_target
        -r $rna_alignment_reference
    > $output
]]>
    </command>
    <inputs>
        <param format="clustalw,stockholm" name="rna_alignment_target" type="data" label="Target RNA Alignment" help="(-t)" />
        <param format="clustalw,stockholm" name="rna_alignment_reference" type="data" label="Reference RNA Alignment" help="(-r)" />
    </inputs>
    <outputs>
        <data name="output" format="txt" />
    </outputs>
    <tests>