Mercurial > repos > rnateam > blockclust

changeset 2:0deb03bc35df draft

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Uploaded
author rnateam
date Mon, 21 Oct 2013 11:34:09 -0400
parents f5600b583d85
children 8d17799a1f91
files tool_dependencies.xml
diffstat 1 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Oct 21 11:25:02 2013 -0400
+++ b/tool_dependencies.xml	Mon Oct 21 11:34:09 2013 -0400
@@ -18,15 +18,15 @@
                     <destination>$INSTALL_DIR/data/</destination>
                 </action>
                 <action type="download_file">https://github.com/bgruening/download_store/raw/master/blockclust/blockclust-data-1.0/annotations/dm3.tar.gz</action>
-                <action type="shell_command">tar -xfv dm3.tar.gz -C $INSTALL_DIR/data/annotations/</action>
+                <action type="shell_command">tar -xfvz dm3.tar.gz -C $INSTALL_DIR/data/annotations/</action>
                 <action type="download_file">https://github.com/bgruening/download_store/raw/master/blockclust/blockclust-data-1.0/annotations/hg19.tar.gz</action>
-                <action type="shell_command">tar -xfv hg19.tar.gz -C $INSTALL_DIR/data/annotations/</action>
+                <action type="shell_command">tar -xfvz hg19.tar.gz -C $INSTALL_DIR/data/annotations/</action>
                 <action type="download_file">https://github.com/bgruening/download_store/raw/master/blockclust/blockclust-data-1.0/annotations/mm10.tar.gz</action>
-                <action type="shell_command">tar -xfv mm10.tar.gz -C $INSTALL_DIR/data/annotations/</action>
+                <action type="shell_command">tar -xfvz mm10.tar.gz -C $INSTALL_DIR/data/annotations/</action>
                 <action type="download_file">https://github.com/bgruening/download_store/raw/master/blockclust/blockclust-data-1.0/annotations/panTro4.tar.gz</action>
-                <action type="shell_command">tar -xfv panTro4.tar.gz -C $INSTALL_DIR/data/annotations/</action>
+                <action type="shell_command">tar -xfvz panTro4.tar.gz -C $INSTALL_DIR/data/annotations/</action>
                 <action type="download_file">https://github.com/bgruening/download_store/raw/master/blockclust/blockclust-data-1.0/annotations/rheMac3.tar.gz</action>
-                <action type="shell_command">tar -xfv rheMac3.tar.gz -C $INSTALL_DIR/data/annotations/</action>
+                <action type="shell_command">tar -xfvz rheMac3.tar.gz -C $INSTALL_DIR/data/annotations/</action>
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                     <environment_variable name="BLOCKCLUST_DATA_PATH" action="prepend_to">$INSTALL_DIR/data</environment_variable>