diff tool_dependencies.xml @ 8:762937a63301 draft

Uploaded
author rnateam
date Tue, 22 Oct 2013 13:32:07 -0400
parents a2aed24f5846
children 171f6015180f
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Oct 22 11:38:06 2013 -0400
+++ b/tool_dependencies.xml	Tue Oct 22 13:32:07 2013 -0400
@@ -6,6 +6,15 @@
     <package name="R_3_0_1" version="3.0.1">
         <repository changeset_revision="e16e08f41ed7" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
+    <package name="blockclust_rlibs" version="1.0">
+        <action type="setup_r_environment">
+            <repository changeset_revision="e16e08f41ed7" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
+                <package name="R_3_0_1" version="3.0.1" />
+            </repository>
+            <package>http://cran.r-project.org/src/contrib/ggplot2_0.9.3.1.tar.gz</package>
+            <package>http://cran.r-project.org/src/contrib/ape_3.0-11.tar.gz</package>
+        </action>
+    </package>
     <package name="blockclust" version="1.0">
         <install version="1.0">
             <actions>
@@ -46,16 +55,6 @@
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                     <environment_variable action="prepend_to" name="BLOCKCLUST_DATA_PATH">$INSTALL_DIR/data</environment_variable>
                 </action>
-                <action type="setup_r_environment">
-                    <repository changeset_revision="e16e08f41ed7" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
-                        <package name="R_3_0_1" version="3.0.1" />
-                    </repository>
-                    <r_package>http://cran.r-project.org/src/contrib/ggplot2_0.9.3.1.tar.gz</r_package>
-                    <r_package>http://cran.r-project.org/src/contrib/ape_3.0-11.tar.gz</r_package>
-                </action>
-                <action type="set_environment">
-                    <environment_variable action="append_to" name="R_LIBS">$INSTALL_DIR</environment_variable>
-                </action>
             </actions>
         </install>
         <readme>