Mercurial > repos > rnateam > bctools
changeset 46:fd42c7f0ad4b draft
Uploaded
author | rnateam |
---|---|
date | Fri, 18 Dec 2015 10:16:27 -0500 |
parents | 0df572b4d644 |
children | 77bb5e0bd5ad |
files | flexbar_dsc.xml |
diffstat | 1 files changed, 2 insertions(+), 1 deletions(-) [+] |
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--- a/flexbar_dsc.xml Fri Dec 18 10:11:09 2015 -0500 +++ b/flexbar_dsc.xml Fri Dec 18 10:16:27 2015 -0500 @@ -6,6 +6,7 @@ <!-- * use paired-end dataset collection as output --> <!-- * currently only works for barcode splitting with paired-end reads --> +<!-- * output is fixed to fastqsanger --> <tool id="flexbardsc" name="Flexbar DSC" version="2.5"> @@ -431,7 +432,7 @@ identifier in the nested collection and identifier_1 is either forward or reverse (for instance samp1_forward.fq). --> - <discover_datasets pattern="FlexbarOutput_barcode_(?P<identifier_0>[^_]+)_(?P<identifier_1>[^_]+)\.fastq" metadata_source="reads" visible="true" ext="reads.ext"/> + <discover_datasets pattern="FlexbarOutput_barcode_(?P<identifier_0>[^_]+)_(?P<identifier_1>[^_]+)\.fastq" metadata_source="reads" visible="true" ext="fastqsanger"/> </collection> </outputs>