Mercurial > repos > rnateam > bctools

changeset 24:a3395297458b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
update flexbar dsc description
author rnateam
date Thu, 17 Dec 2015 10:35:59 -0500
parents 84d743632f5a
children e157f49e0720
files flexbar_dsc.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/flexbar_dsc.xml	Thu Dec 17 10:31:07 2015 -0500
+++ b/flexbar_dsc.xml	Thu Dec 17 10:35:59 2015 -0500
@@ -6,7 +6,7 @@
 
 <tool id="flexbar_dsc" name="Flexbar" version="2.5">
 
-    <description>flexible barcode and adapter removal</description>
+    <description>flexible barcode and adapter removal (data set collections)</description>
 
     <requirements>
         <requirement type="package" version="2.5">flexbar</requirement>
@@ -137,9 +137,9 @@
             $cLogging.rndTags
         #end if
 
-        --target FlexbarOutput 
+        --target FlexbarOutput
         &&
-        for f in *_1.fastq; do mv "\$f" "`basename \$f _1.fastq`_forward.fastq"; done && 
+        for f in *_1.fastq; do mv "\$f" "`basename \$f _1.fastq`_forward.fastq"; done &&
         for f in *_2.fastq; do mv "\$f" "`basename \$f _2.fastq`_reverse.fastq"; done