Mercurial > repos > rnateam > antarna

changeset 8:bf5b1a59ff00 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/antarna/ commit b9de12219a5d06be282f8c3fd9e80369a2b72825-dirty
author rnateam
date Tue, 12 May 2015 11:17:39 -0400
parents 2f68c8d1c080
children 89c880ee32be
files antarna.xml
diffstat 1 files changed, 10 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/antarna.xml	Tue May 12 11:05:45 2015 -0400
+++ b/antarna.xml	Tue May 12 11:17:39 2015 -0400
@@ -142,9 +142,14 @@
   </inputs>
   <outputs>
     <data format="fasta" hidden="false" name="default"/>
+        <change_format>
+            <when input="v" value="True" format="text"/>
+            <when input="ov" value="True" format="text"/>
+        </change_format>
+    </data>
   </outputs>
   <help><![CDATA[   
-a
+.
 
 ===========================
 antaRNA - ant assembled RNA                                   
@@ -157,10 +162,10 @@
    
 - For questions and remarks please feel free to contact us at http://www.bioinf.uni-freiburg.de/
 
-Example calls:
-	antaRNA --Cstr "...(((...)))..." --tGC 0.5 -n 2
-	antaRNA --Cstr ".........AAA(((...)))AAA........." --tGC 0.5 -n 10 --output_file /path/to/antaRNA_TESTRUN -ov
-	antaRNA --Cstr "BBBBB....AAA(((...)))AAA....BBBBB" --Cseq "NNNNANNNNNCNNNNNNNNNNNGNNNNNNUNNN" --tGC 0.5 -n 10
+Example parameters:
+-	--Cstr "...(((...)))..." --tGC 0.5 -n 2
+-	--Cstr ".........AAA(((...)))AAA........." --tGC 0.5 -n 10 --output_file /path/to/antaRNA_TESTRUN -ov
+-	--Cstr "BBBBB....AAA(((...)))AAA....BBBBB" --Cseq "NNNNANNNNNCNNNNNNNNNNNGNNNNNNUNNN" --tGC 0.5 -n 10
 
 
 		]]></help>