Mercurial > repos > rgarcia > pyvenny
changeset 5:3c1c131acb07 draft
Uploaded with bin subdir
| author | rgarcia |
|---|---|
| date | Mon, 05 Jan 2015 13:55:00 -0500 |
| parents | 706b644c8e89 |
| children | d1d4467d480a |
| files | bin/vennyplot vennyplot |
| diffstat | 2 files changed, 22 insertions(+), 22 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/bin/vennyplot Mon Jan 05 13:55:00 2015 -0500 @@ -0,0 +1,22 @@ +#!/usr/bin/env python + +import argparse +from pyvenny import render_four_set_venn + +parser = argparse.ArgumentParser(description='Generate a Venn diagram of four files taken as sets of lines.') +parser.add_argument('--output', type=argparse.FileType('w'), required=True, help="absolute path to output file" ) +parser.add_argument('--sets', type=argparse.FileType('r'), required=True, nargs=4, help="absolute paths to four files" ) +parser.add_argument('--labels', required=False, nargs=4, help="four set labels" ) + +args = parser.parse_args() + +if args.labels: + titles = {'A': args.labels[0], + 'C': args.labels[1], + 'B': args.labels[2], + 'D': args.labels[3]} +else: + titles = {'A': 'A', 'C': 'C', 'B': 'B', 'D': 'D'} + +args.output.write( render_four_set_venn( *[set(f.readlines()) for f in args.sets], + titles=titles ) )
--- a/vennyplot Mon Jan 05 13:25:22 2015 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,22 +0,0 @@ -#!/usr/bin/env python - -import argparse -from pyvenny import render_four_set_venn - -parser = argparse.ArgumentParser(description='Generate a Venn diagram of four files taken as sets of lines.') -parser.add_argument('--output', type=argparse.FileType('w'), required=True, help="absolute path to output file" ) -parser.add_argument('--sets', type=argparse.FileType('r'), required=True, nargs=4, help="absolute paths to four files" ) -parser.add_argument('--labels', required=False, nargs=4, help="four set labels" ) - -args = parser.parse_args() - -if args.labels: - titles = {'A': args.labels[0], - 'C': args.labels[1], - 'B': args.labels[2], - 'D': args.labels[3]} -else: - titles = {'A': 'A', 'C': 'C', 'B': 'B', 'D': 'D'} - -args.output.write( render_four_set_venn( *[set(f.readlines()) for f in args.sets], - titles=titles ) )