Mercurial > repos > rgarcia > pyvenny
comparison bin/vennyplot @ 5:3c1c131acb07 draft
Uploaded with bin subdir
author | rgarcia |
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date | Mon, 05 Jan 2015 13:55:00 -0500 |
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4:706b644c8e89 | 5:3c1c131acb07 |
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1 #!/usr/bin/env python | |
2 | |
3 import argparse | |
4 from pyvenny import render_four_set_venn | |
5 | |
6 parser = argparse.ArgumentParser(description='Generate a Venn diagram of four files taken as sets of lines.') | |
7 parser.add_argument('--output', type=argparse.FileType('w'), required=True, help="absolute path to output file" ) | |
8 parser.add_argument('--sets', type=argparse.FileType('r'), required=True, nargs=4, help="absolute paths to four files" ) | |
9 parser.add_argument('--labels', required=False, nargs=4, help="four set labels" ) | |
10 | |
11 args = parser.parse_args() | |
12 | |
13 if args.labels: | |
14 titles = {'A': args.labels[0], | |
15 'C': args.labels[1], | |
16 'B': args.labels[2], | |
17 'D': args.labels[3]} | |
18 else: | |
19 titles = {'A': 'A', 'C': 'C', 'B': 'B', 'D': 'D'} | |
20 | |
21 args.output.write( render_four_set_venn( *[set(f.readlines()) for f in args.sets], | |
22 titles=titles ) ) |