comparison bin/vennyplot @ 5:3c1c131acb07 draft

Uploaded with bin subdir
author rgarcia
date Mon, 05 Jan 2015 13:55:00 -0500
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4:706b644c8e89 5:3c1c131acb07
1 #!/usr/bin/env python
2
3 import argparse
4 from pyvenny import render_four_set_venn
5
6 parser = argparse.ArgumentParser(description='Generate a Venn diagram of four files taken as sets of lines.')
7 parser.add_argument('--output', type=argparse.FileType('w'), required=True, help="absolute path to output file" )
8 parser.add_argument('--sets', type=argparse.FileType('r'), required=True, nargs=4, help="absolute paths to four files" )
9 parser.add_argument('--labels', required=False, nargs=4, help="four set labels" )
10
11 args = parser.parse_args()
12
13 if args.labels:
14 titles = {'A': args.labels[0],
15 'C': args.labels[1],
16 'B': args.labels[2],
17 'D': args.labels[3]}
18 else:
19 titles = {'A': 'A', 'C': 'C', 'B': 'B', 'D': 'D'}
20
21 args.output.write( render_four_set_venn( *[set(f.readlines()) for f in args.sets],
22 titles=titles ) )