Mercurial > repos > remimarenco > regtools_junctions_extract

annotate tool_dependencies.xml @ 3:d77e38c4600e draft

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planemo upload commit 7f110d46c04f7f69aa7b61af0d3eb86e15fd14c6-dirty
author remimarenco
date Fri, 22 Jul 2016 16:37:30 -0400
parents 7ca55fd6ee44
children ce43595f430d
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="regtools" version="0.3.0">
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4 <install version="1.0">
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5 <actions>
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6 <action type="shell_command">git clone --recursive https://github.com/griffithlab/regtools.git</action>
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7 <action type="change_directory">regtools</action>
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8 <action type="make_directory">build</action>
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9 <action type="change_directory">build</action>
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11 <action type="set_environment_for_install">
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12 <repository changeset_revision="0:1aea698a1c63" name="package_cmake_3_2_3"
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13 owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
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14 <package name="cmake" version="3.2.3"/>
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15 </repository>
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16 </action>
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17 <action type="shell_command">cmake ..</action>
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18
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19 <action type="shell_command">build</action>
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20 <action type="move_file">
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21 <source>regtools</source>
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22 <destination>$INSTALL_DIR</destination>
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23 </action>
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24 <action type="set_environment">
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25 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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26 </action>
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27 </actions>
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28 </install>
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29 </package>
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30 </tool_dependency>