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1 #!/usr/bin/perl -w
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2
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3 # make a backup
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4 my $TOOL_XML="/mnt/galaxyTools/galaxy-central/tool_conf.xml";
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5 print "\nmaking backup of $TOOL_XML ...";
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6 system ("sudo cp $TOOL_XML $TOOL_XML.bak") || die ;
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7 system ("sudo cp tool_conf.xml /mnt/galaxyTools/galaxy-central/") || die ;
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8
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9 my $DIR="/mnt/galaxyTools/galaxy-central/tools/qtrinh";
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10 if (! -e $DIR) {
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11 system ("sudo mkdir $DIR") || die ;
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12 }
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13
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14 system ("sudo cp gc_content.xml gc_content.pl $DIR") || die ;
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15
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16 system ("sudo chown -R galaxy:galaxy $DIR") || die ;
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17 system ("sudo chmod -R a+rx $DIR") || die ;
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18
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19 print "\n\ndone setting up ... please restart Galaxy ...\n\n";
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20
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21
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