Mercurial > repos > public-health-bioinformatics > screen_abricate_report
annotate abricate_report_screening_files.loc.sample @ 1:45542cd244ad draft default tip
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report commit 1d569fc27b052d1982d82ca19455caaff6386f46"
author | public-health-bioinformatics |
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date | Thu, 31 Oct 2019 15:14:36 -0400 |
parents | 2c6153023368 |
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2c6153023368
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff
changeset
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1 # Expect three columns, tab separated, as follows: |
2c6153023368
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff
changeset
|
2 # - value (Galaxy records this in the Galaxy DB) |
2c6153023368
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff
changeset
|
3 # - name (Galaxy shows this in the UI) |
2c6153023368
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff
changeset
|
4 # - path (Path to the abricate report screening file (tsv format)) |
2c6153023368
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff
changeset
|
5 # |
2c6153023368
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff
changeset
|
6 # e.g. |
2c6153023368
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff
changeset
|
7 # 76cc857a-7747-4d69-b2a3-a8fbddbf64c2<tab>Carbapenemase Genes<tab>/path/to/screening_file.tsv |