Mercurial > repos > public-health-bioinformatics > screen_abricate_report

annotate abricate_report_screening_files.loc.sample @ 0:2c6153023368 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
author public-health-bioinformatics
date Wed, 30 Oct 2019 23:01:01 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
2c6153023368 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff changeset
1 # Expect three columns, tab separated, as follows:
2c6153023368 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff changeset
2 # - value (Galaxy records this in the Galaxy DB)
2c6153023368 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff changeset
3 # - name (Galaxy shows this in the UI)
2c6153023368 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff changeset
4 # - path (Path to the abricate report screening file (tsv format))
2c6153023368 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff changeset
5 #
2c6153023368 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff changeset
6 # e.g.
2c6153023368 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report"
public-health-bioinformatics
parents:
diff changeset
7 # 76cc857a-7747-4d69-b2a3-a8fbddbf64c2<tab>Carbapenemase Genes<tab>/path/to/screening_file.tsv