Mercurial > repos > public-health-bioinformatics > fastp_json_to_tabular

annotate fastp_json_to_tabular.xml @ 2:2c2d59b3d64d draft

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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 225d05a1238c15522c9bc3b47fcc6c0bbe2e7b50-dirty"
author public-health-bioinformatics
date Thu, 10 Mar 2022 00:13:02 +0000
parents 93332d66ee79
children
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dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
parents:
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1 <tool id="fastp_json_to_tabular" name="Convert fastp json report to tabular" version="0.1.0">
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2c2d59b3d64d "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 225d05a1238c15522c9bc3b47fcc6c0bbe2e7b50-dirty"
public-health-bioinformatics
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2 <description>Convert fastp json report to tabular</description>
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dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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3 <requirements>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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4 </requirements>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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5 <command detect_errors="exit_code"><![CDATA[
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2c2d59b3d64d "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 225d05a1238c15522c9bc3b47fcc6c0bbe2e7b50-dirty"
public-health-bioinformatics
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6 '$__tool_directory__/fastp_json_to_tabular.py'
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93332d66ee79 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 225d05a1238c15522c9bc3b47fcc6c0bbe2e7b50-dirty"
public-health-bioinformatics
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7 ${report} > ${output}
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dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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8 ]]></command>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
parents:
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9 <inputs>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
parents:
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10 <param name="report" type="data" format="json" />
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
parents:
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11 </inputs>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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12 <outputs>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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13 <data name="output" label="fastp report" format="tabular"/>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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14 </outputs>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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15 <tests>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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16 </tests>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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17 <help><![CDATA[
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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18 ]]></help>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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19 <citations>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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20 </citations>
dc655c5e77d6 "planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit c6ac9f7bd10c58d2b4168cab62b812d4d76283fe"
public-health-bioinformatics
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21 </tool>