Mercurial > repos > pjbriggs > trimmomatic
view tool_dependencies.xml @ 1:a2e6088d1165 draft
Uploaded latest version to check tool tests.
author | pjbriggs |
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date | Thu, 19 Mar 2015 06:13:35 -0400 |
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children | 2801d3cd21ee |
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<?xml version="1.0"?> <tool_dependency> <package name="trimmomatic" version="0.32"> <install version="1.0"> <actions> <action type="download_by_url">http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.32.zip</action> <action type="move_file"> <source>trimmomatic-0.32.jar</source> <destination>$INSTALL_DIR</destination> </action> <action type="move_directory_files"> <source_directory>adapters</source_directory> <destination_directory>$INSTALL_DIR/adapters</destination_directory> </action> <action type="set_environment"> <environment_variable name="TRIMMOMATIC_DIR" action="set_to">$INSTALL_DIR</environment_variable> </action> <action type="set_environment"> <environment_variable name="TRIMMOMATIC_ADAPTERS_DIR" action="set_to">$INSTALL_DIR/adapters</environment_variable> </action> </actions> </install> <readme>Trimmomatic requires the Java Runtime Environment </readme> </package> </tool_dependency>