Mercurial > repos > pjbriggs > pal_finder

annotate test-data/illuminaPE_r2_no_microsats.fq @ 15:a3af1ff4cad1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
pal_finder 0.02.04.7 for testing.
author pjbriggs
date Mon, 14 May 2018 11:10:19 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
15
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
1 @ILLUMINA-545855:49:FC61RLR:2:1:10979:1695 2:N:0:TCCTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
2 TACTGTTTAGAAAGCCTGTTCCAGAACTTGATCACTGTCACAGAAAATCTTTCTTACTATCCAGACTGAAGCTACCCTGGTGCAGCTTTGTGCTGTTACCTTGAGTCATGTCATCA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
3 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
4 IIIIIHIIIIIHIIIIHIHIIIIIIIHIIIHIIIHIHGIIIIIIHEHHHHHHHHIIHIIHFHHEHHIGHHGHGIHGHHFGAGIEHHGEGHBFIFDBHHHGDFHBDBHGGFGD8EB@
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
5 @ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 2:N:0:TCCTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
6 TATATATATATATAAACATATATATATATATTTTTTTCTCATTTCAGAACAAAAGTGAGATGAACTTTAATATGGTGGGGTGTATTTTGAGAGACTCTCTAGTTTGGGAGGAGTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
7 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
8 DDDDDDDDDDDD:D@D+DDDDDDDDDDDD6DDDDD>A@:5>@##########################################################################
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
9 @ILLUMINA-545855:49:FC61RLR:2:1:1978:1220 2:N:0:TCCTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
10 TCCTCTGACTAGGCAACAACAGCTTTTTTGCTCCTGGGCAGAGGTGTTCCGAGTGTATATTTTTTATAATTACGGCGCGCATTGGAAATTGATGTTATTTTATTTTGCGTGTGTGT
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
11 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
12 B?/?################################################################################################################
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
13 @ILLUMINA-545855:49:FC61RLR:2:1:5879:1238 2:N:0:TCCTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
14 TCCCCACCCTGTCATGGTTCTATGTATATATATATAGCCATGTGTGTGGTACCAGGGATAGGTACCTGGGATTGGGGCAGTGACACTTTAGTGCCCCGTACACTACATGATGTTTT
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
15 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
16 HHHHHHHHHHHHHHHHHEHHGGGGFDHGHGHHHHHHFHHHHHGHEHEHEBEHEFB8EEEFEDAGEDBCEBBB@>BEC>@B@DCBBBECBB<AECBBBC>BA>B<;BA@A@######
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
17 @ILLUMINA-545855:49:FC61RLR:2:1:6204:1090 2:N:0:TCCTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
18 TGCTTTGGTTCTAAGAGAAAAACAAGTGATGCACAAGCAATTCCTCGCCACCACCCAACTGATGCCCAGCCACCCCCCCAAGCAGTGAAAGAGAGAGAGAGATGAACCCCCTTCAA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
19 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
20 HHHDBHHHEFGHHHHEHFHEHDDDDD@HHEHHEEHEFFEEEGDEGGGGEGEB>EBC>@@@@@@BB@FEBFBBB@A>AAA<;>A>;3>=??>>BB>?>@?1?>:9*@##########
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
21 @ILLUMINA-545855:49:FC61RLR:2:1:8044:1926 2:N:0:TCCTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
22 TCAGGCAAGGTCACTGCCACCACTGGGGAGTGCCTGTTTCTGAAGGGCCCAGCCAACTCTGTCACAAGCTTTAACCATAATAAATCAGGAGGAGAGACAGGAGGATGCTGTGCTTT
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
23 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
24 IIIIIIIIIIHIIIIIIIIIIIIIIGIIIIFIIIIIGHHIIIIIGGEIHGHGHHHGGCHHCGGGGGGHGHGEGEGEGGGDGBECCBGGEDGB;8?BBBBDABC@:3==;=:<30:6
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
25 @ILLUMINA-545855:49:FC61RLR:2:1:8157:1636 2:N:0:TCCTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
26 TAAACAACCAAATGAAACCATCTTTTCTACACAGCTCAAGTAGCCCTACATACAACACAAGCCACCTACAAATCAGGACTGATGGTAAGGCTGACAATCCAATCCACCACAACAAC
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
27 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
28 HFHHHHHHHHHHHHDHGHHDHHHHHHHHHHHHHHHHHHGGGHHGHHHHHHHHHHHGHHHHH@HHHFHGHFHHEHHHHHHDHBFEBBHFFDHE>EFHBEFD################
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
29 @ILLUMINA-545855:49:FC61RLR:2:1:8899:1514 2:N:0:TCCTGA
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
30 TATCATTGAAATTTTTATAAAAACTGTGAAGAGAAAAATGTAACACTTCAGAAACGCAATTATTTTGAGATGTCCAGATTTTTTTTTATACTTCCACTGCTGTGTGTGTGTGTAAC
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
31 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
pjbriggs
parents:
diff changeset
32 IG+GGGIIIIIIIIIIDIIIIIIGHHIIHIIIIIEGHIHIHIIHIIIIIIIIIIIIIIHIIDIIIIIEDIIIDIHGHFIIIIIIIIIHIFFBHGIGBGGHBDBFEGEGCGEIEDEB