changeset 4:a881c5b7162c draft

More changes for tool dependencies.
author pjbriggs
date Mon, 20 Apr 2015 11:11:05 -0400
parents 881a48588832
children 9f6d5cae9181
files README.rst macs21_wrapper.xml tool_dependencies.xml
diffstat 3 files changed, 3 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/README.rst	Mon Apr 20 11:08:43 2015 -0400
+++ b/README.rst	Mon Apr 20 11:11:05 2015 -0400
@@ -61,7 +61,7 @@
 Version    Changes
 ---------- ----------------------------------------------------------------------
 2.1.0-2    - Add option to create bigWig file from bedGraphs; fix bug with -B
-             option.
+             option; make --mfold defaults consistent.
 2.1.0-1    - Initial version
 ========== ======================================================================
 
--- a/macs21_wrapper.xml	Mon Apr 20 11:08:43 2015 -0400
+++ b/macs21_wrapper.xml	Mon Apr 20 11:11:05 2015 -0400
@@ -3,6 +3,7 @@
     <requirement type="package" version="2.7">python</requirement>
     <requirement type="package" version="1.9">numpy</requirement>
     <requirement type="package" version="2.1.0.20140616">macs2</requirement>
+    <requirement type="package" version="1.0.0">ucsc_tools_for_macs21</requirement>
   </requirements>
   <description>Model-based Analysis of ChIP-Seq</description>
   <command interpreter="python">
--- a/tool_dependencies.xml	Mon Apr 20 11:08:43 2015 -0400
+++ b/tool_dependencies.xml	Mon Apr 20 11:11:05 2015 -0400
@@ -5,7 +5,7 @@
     <repository changeset_revision="266529386609" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   </package>
   <!-- Subset of UCSC tools -->
-  <package name="ucsc_tools" version="1.0">
+  <package name="ucsc_tools_for_macs_21" version="1.0">
       <install version="1.0">
             <actions>
 	      <!-- fetchChromSizes -->